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Microbiome analysis using a single application

MEGAN6 is a comprehensive toolbox for interactively analyzing microbiome data. All the interactive tools you need in one application.

  • Taxonomic analysis using the NCBI taxonomy or a customized taxonomy such as SILVA
  • Functional analysis using InterPro2GO, SEED, eggNOG or KEGG
  • Bar charts, word clouds, Voronoi tree maps and many other charts
  • PCoA, clustering and networks
  • Supports metadata
  • MEGAN parses many different types of input

Why use MEGAN6?

 The software is:
  1. Easy to use. MEGAN6 is a single application and all features are available through menus, toolbars and graphics. No scripting skills required.
  2. Powerful. MEGAN6 allows you to work with hundreds of samples containing hundreds of millions of sequencing reads. Blast-like analysis can be performed using DIAMOND.
  3. Comprehensive. MEGAN6 offers a large range of analysis tools, and is under active development.