BOL
Log in
Username or email
Password
Remember me
Register
Lost password
Activity
News
Opportunity
ResearchLabs
Questions
Pages
Discussion
More
BioScripts
Blogs
Bookmarks
Files
Fun
Groups
Polls
The Wire
Tryst
Videos
Our Sponsors
Download
BioinformaticsOnline(BOL) Apps
in your chrome browser.
Bookmarks
Murasaki
Murasaki
Anjana
@anjana
Public
By
Anjana
2758 days ago
Bioinformatics
Musrsaki
Plot
Synteny
Genome
Viewer
Comparative genomics
http://murasaki.dna.bio.keio.ac.jp/wiki/index.php?Murasaki
Murasaki is an anchor alignment program that is
exteremely fast (17 CPU hours for whole Human x Mouse genome (with 40 nodes: 35 wall minutes), or 8 mammals in 21 CPU hours (42 wall minutes))
scalable (Arbitrarily parallelizable across multiple nodes using MPI)
memory efficient. (Even a single node with 16GB of ram can handle over 1Gbp of sequence)
unlimited by pattern length or selection
repeat tolerant
Related items
View all 1516 related items
GenomeRing: alignment visualization based on SuperGenome coordinates
2648 days ago
Neelam Jha
bookmark
Strudel
2758 days ago
Anjana
bookmark
RCircos: an R package for Circos 2D track plots
2891 days ago
Jit
bookmark
VAGUE:Velvet Assembler Graphical Front End
2611 days ago
Jit
bookmark
ABACAS
2619 days ago
Surabhi Chaudhary
bookmark
gbtools: Interactive Visualization of Metagenome Bins in R
2581 days ago
Jit
bookmark
CGView - Circular Genome Viewer
2769 days ago
Jit
bookmark
BLAST Ring Image Generator (BRIG)
2758 days ago
Anjana
bookmark