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  • SuRankCo: supervised ranking of contigs in de novo assemblies

SuRankCo: supervised ranking of contigs in de novo assemblies

https://sourceforge.net/projects/surankco/

SuRankCo is a machine learning based software to score and rank contigs from de novo assemblies of next generation sequencing data. It trains with alignments of contigs with known reference genomes and predicts scores and ranking for contigs which have no related reference genome yet.

https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-015-0644-7