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  • GOHTAM: a website for ‘Genomic Origin of Horizontal Transfers, Alignment and Metagenomics’

GOHTAM: a website for ‘Genomic Origin of Horizontal Transfers, Alignment and Metagenomics’

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3338014/

This website allows the detection of horizontal transfers based on a combination of parametric methods and proposes an origin by researching neighbors in a bank of genomic signatures. This bank is also used to research an origin to DNA fragments from metagenomics studies.

Different services are provided like the possibility of inferring a phylogenetic tree with sequence signatures or comparing two genomes and displaying the rearrangements that happened since their separation.

Availability and implementation: http://gohtam.rpbs.univ-paris-diderot.fr/

Contact: rf.toredid-sirap-vinu@ennavahcsed.kcirtaprf.arni.yuoj@tellam.civodul

Supplementary information: Supplementary data are available at Bioinformatics online http://gohtam.rpbs.univ-paris-diderot.fr:8080/Data/bin/GOHTAM_bin.tgz