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R4RNA: A R package for RNA visualization and analysis

http://www.e-rna.org/r-chie/files/R4RNA.pdf

Check out the tutorial vignette for a short demo of how to use functions in the package. All figures created by the web interface are possible using the package with just a few command calls.

Features:

  • Customized figure legends and titles
  • Customized figure sizes, resolution, and file formats
  • Visualization of very large structures and alignments
  • Customzied width and styles for arcs, lines, and text
  • Convert formats between vienna, connect, bpseq and helix
  • Colour basepairs by frequency from an ensemble of structures
  • Mass produce diagrams with automated scripts

http://www.e-rna.org/r-chie/download.cgi