DAVI: Deep learning-based tool for alignment and single nucleotide variant identification
DAVI consists of models for both global and local alignment and for variant calling. We have evaluated the performance of DAVI against existing state-of-the-art tool sets and found tha...1135 days ago
Nucl2Vec: Local alignment of DNA sequences using Distributed Vector Representation
We demonstrate a novel approach forlocal alignment of DNA reads with respect to refe...ing(Nucl2Vec) and k-nearest neighbor for the alignment.With our new approach we have reduced computation cost forlocal alignment , while achieving accuracy co...1135 days ago
Comparison of Short Read De Novo Alignment Algorithms
Excellent article to introduce different sequencing methods along with tools for de novo assembly of sequencing reads and their relevant references. Title: Comparison of Short Read De Novo Alignment Algorithms Author: Nikhil Gopal3899 days ago
3642 days ago
A Brief Bioinformatics Tutorial
...tein sequence, how to blast it against the database of your choice to find homologues, how to perform a multiple alignment of the homologues you've selected and how to edit this alignment. The Structure part is about...3626 days ago
7th International Conference on Bioinformatics and Computational Biology (BICoB)
...ly, genome annotation, gene finding, alternative splicing, EST analysis and comparative genomics. Sequence analysis: Multiple sequence alignment, sequence search and clusteri...3488 days ago
1082 days ago
Alignment of closely related whole genomes/scaffolds
...udy of populations, pan-genomes, and genome evolution.This bookmaks have been created to report new tools for whole genome alignments. Please report new whole genome alignment tools under comment sections.3008 days ago
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