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Results for "Alignment"

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• • Neelam Jha@neelam

  

  RAMICS substantially outperforms other mapping approaches for alignment of coding DNA to reference sequences. http://hiv.sanbi.ac.za/tools#/ramics #Tools #Alignment #NGS #RAMICS

  Tags: Tools, Alignment, NGS, RAMICS

  3587 days ago

• • Jitendra Narayan@admin

  

  MafFilter: a highly flexible and extensible multiple genome alignment files processor http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3904536/ #MultipleGenomeAlignment #MAF #Genome #Alignment

  Tags: MultipleGenomeAlignment, MAF, Genome, Alignment

  3538 days ago

• • Jitendra Narayan@admin

  

  Mercator that constructs orthology maps between multiple whole genomes https://www.biostat.wisc.edu/~cdewey/mercator/ #Synteny #Orthology #Map #Construction #Alignment

  Tags: Synteny, Orthology, Map, Construction, Alignment

  3525 days ago

• • Jitendra Narayan@admin

  

  Genome alignment with graph data structures: a comparison http://www.biomedcentral.com/1471-2105/15/99 #Genome #Alignment #Data #Graph

  Tags: Genome, Alignment, Data, Graph

  3516 days ago

• • Jitendra Narayan@admin

  

  CYNTENATOR: Progressive Gene Order Alignment of 17 Vertebrate Genomes http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0008861#pone-0008861-g003 #Alignment #CYNTENATOR #Genome

  Tags: Alignment, CYNTENATOR, Genome

  3504 days ago

• • John Parker@parker

  

  MAP2: multiple alignment of syntenic genomic sequences http://nar.oxfordjournals.org/content/33/1/162.full #Alignment #Synteny #Sequence

  Tags: Alignment, Synteny, Sequence

  3498 days ago

• • Jitendra Narayan@admin

  

  Alignathon: A collaborative competition to assess the state of the art in whole genome sequence alignment. http://compbio.soe.ucsc.edu/alignathon/index.html #Alignment #Simulation #Evolver

  Tags: Alignment, Simulation, Evolver

  3460 days ago

• • Jit@jit.aber

  

  AutoOrthoGen http://www.cs.toronto.edu/~buske/documents/buske_2009_autoorthogen.pdf #Genome #Orthologous #Evolver #Multiple #Alignment

  Tags: Genome, Orthologous, Evolver, Multiple, Alignment

  3461 days ago

• • Rahul Nayak@rahul

  

  Sequence analysis http://bio.lundberg.gu.se/courses/ht03/bio1/bio1_e2b.html #Sequence #Alignment #Algorithms #C #C++

  Tags: Sequence, Alignment, Algorithms, C, C

  3444 days ago

• • Jit@jit.aber

  

  AlignGraph: algorithm for secondary de novo genome assembly guided by closely related references http://bioinformatics.oxfordjournals.org/content/30/12/i319.full #AlignGraph #Alignment #Algo #Referen

  Tags: AlignGraph, Alignment, Algo, Referen

  3444 days ago

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