Results for "Apollo"

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  • Web Apollo: a web-based genomic annotation editing platform

    Web Apollo is the first instantaneous, collaborative genomic annotation editor available on the web. One of the natural consequences following from current advances in sequencing technology is that there are more and more researchers sequencing new genomes. These researchers require tools to desc...

    Tags: Web, Apollo, genomic, annotation, editing, platform

    2462 days ago

  • Apollo: First instantaneous, collaborative genomic annotation editor available on the Web

    Apollo is a plug-in for the JBrowse Genome Viewer. In addition to genes and pseudogenes, users can annotate ncRNAs (snRNA, snoRNA, tRNA, rRNA), miRNAs, repeat regions, and transposable elements; each annotation type has its own configuration of the ‘Information Editor’. ...

    Tags: Apollo, collaborative, genomic, annotation, editor, Web, genome

    1790 days ago

  • Apollo: a sequence annotation editor

    The well-established inaccuracy of purely computational methods for annotating genome sequences necessitates an interactive tool to allow biological experts to refine these approximations by viewing and independently evaluating the data supporting each annotation. Apollo was developed to meet thi...

    Tags: Apollo, sequence, annotation, editor, synteny

    1702 days ago

  • Apollo: A Sequencing-Technology-Independent, Scalable, and Accurate Assembly Polishing Algorithm

    Apollo is an assembly polishing algorithm that attempts to correct the errors in an assembly. It can take multiple set of reads in a single run and polish the assemblies of genomes of any size. Described by Firtina et al. (preliminary version at https://arxiv.org/pdf/1902.04341.pdf More at&...

    Tags: Apollo, Sequencing, Technology, Independent, Scalable, Accurate, Assembly, Polishing, Algorithm

    1500 days ago