Best book Titles for Learning Bionformatics
...gy, Vol 194) , Christoph Kannicht (Editor), 2002, Humana Press Peptide Arrays on Membrane Supports: Synthe...rmacogenetics, Wendell Weber, 1997, Oxford University Press DNA Microarrays Statistical Analysis of G...3902 days ago
Perl one-liner for bioinformatician !!!
....perl -le '@odd = grep {$_ % 2 == 1} 1..100; print "@odd"'#Generates an array of odd numbers.perl -le '@even = grep {$_ % 2 == 0} 1..100; print "@even"'#Generate an array of even numbersperl -lpe 'y/A...3613 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...ed scientific publications Workflows for microarray and PCR data include: Gene ex...commercial next generation sequencing and microarray file format as well as text f...ation file -seg, markers file -mk (required); -array file list -alf, CNV file -cnv...2894 days ago
Genome Assembly Tools and Software - PART1 !!
...extremely high and variable depth. SFA-SPA 0.2.1 – A Suffix Array based Short Peptide Assembler for Metagenomic Data SFA-SPA is a suffix array based short peptide assembler...2670 days ago
Perl Special Vars Quick Reference
...lated lists) $; Subscript separator. (Use a real multidimensional array instead.) Formats $...ning current environment variables %SIG Signal handlers. $[ Array and substr first element (Dep...2629 days ago
Alignment-free sequence comparison tools available for next-generation sequencing data analysis
...d) Software (Python) https://github.com/danielnavarrogomez/phy-mer LAVA Genotyping of known SNPs (dbSNP and Affymetrix's Genome-Wide Human SNP Array) from raw NGS reads (k-mer ba...2356 days ago
Edit distance application in bioinformatics !
...CSS_Sorted ); my $lcss_ary_ref = LCSS( \@SEQ1, \@SEQ2 ); # ref to array my $lcss_string = LCSS(...; # string my $css_ary_ref = CSS( \@SEQ1, \@SEQ2 ); # ref to array of arrays my $css_str_re...2326 days ago
Bioinformatics Web Application Development with Perl
...Perl web programming follows a stricter separation of business logic, URL and request routing, and output. The days of slinging a string here, an array there, a Perl hash yonder, de...2306 days ago
PerlOneLiner for Bioinformatician
...p { (($ip>>8*($_))&0xFF) } reverse 0..3' STRING CREATION AND ARRAY CREATION---------------------...list of elementsperl -le '@list = (1,2)x20; print "@list"' # Create an array from a string@months = split...2287 days ago
Installing Bio::SCF perl module
...-I../scf -I../exp_file -I../utils -I/usr/local/include -fPIC -MT array.o -MD -MP -MF ".deps/array.Tpo" -c -o array.o `test -f '...sr/local/include/io_lib/scf.h' /usr/bin/install -c -m 644 'utils/array.h' '/usr/local/include/io_lib...2203 days ago