Results for "Assembly"

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  • Comparison of Short Read De Novo Alignment Algorithms

    Excellent article to introduce different sequencing methods along with tools for de novo assembly of sequencing reads and their relevant references. Title: Comparison of Short Read De Novo Alignment Algorithms  Author: Nikhil Gopal

    Tags: Sequencing, assembly, de novo assembly, velvet

    1408 days ago

  • Genome Assembly & Analysis Tool Box (GATB)!! http://gatb.inria.fr/ #genome #assembly

    Tags: genome, assembly

    992 days ago

  • De #Bruijn #Graph #assembly http://www.cs.jhu.edu/~langmea/resources/lecture_notes/assembly_dbg.pdf

    Tags: Bruijn, Graph, assembly

    364 days ago

  • #Contiguous and #accurate de novo #assembly of #metazoan genomes with modest long read coverage https://academic.oup.com/nar/article-lookup/doi/10.1093/nar/gkw654

    Tags: Contiguous, accurate, assembly, metazoan

    122 days ago

  • Understanding #Overlap Layout #Consensus #assembly http://www.cs.jhu.edu/~langmea/resources/lecture_notes/assembly_olc.pdf #OLC #Assembly

    Tags: Overlap, Consensus, assembly, OLC, Assembly

    117 days ago

  • Steps for #Prokaryotic #genome #assembly and #annotation http://www.edamamecourse.org/docs/metagenome_assembly_and_annotation.html

    Tags: Prokaryotic, genome, assembly, annotation

    115 days ago

  • Genome assembly tutorial http://marinetics.org/teaching/hts/Assembly.html #assembly #Tutorial #MIRA #IonTorrent

    Tags: assembly, Tutorial, MIRA, IonTorrent

    89 days ago

  • All about #newbler #assembly https://contig.wordpress.com/ #NGS

    Tags: newbler, assembly, NGS

    29 days ago

  • Bacterial genome assembly tips using Valvet http://pathogenomics.bham.ac.uk/blog/2009/09/tips-for-de-novo-bacterial-genome-assembly/ #Assembly #NGS #Bacteria #Genome #Tricks #Tips #Velvet

    Tags: Assembly, NGS, Bacteria, Genome, Tricks, Tips, Velvet

    1124 days ago

  • Commercial and public next-gen-seq (NGS) software

    Integrated solutions CLCbio Genomics Workbench - de novo and reference assembly of Sanger, Roche FLX, Illumina, Helicos, and SOLiD data. Commercial next-gen-seq software that extends the CLCbio Main Workbench software. Includes SNP detection, CHiP-seq, browser and other features. Commercial. Wind...

    Tags: Bioinformatics, Computational Biology, NGS, Next generation sequencing, Tools, Software, SNP, Assembly, Pipeline

    1017 days ago