List of bioinformatics packages for NGS analysis !
Package suites gather software packages and installation tools for specific languages or platforms. We have some for bioinformatics software. Bioconductor &nd...1105 days ago
Integrative RNA and ChIP-Seq analysis of regulatory T-cells
Integrative RNA and ChIP-Seq analysis of regulatory T-cells , a Strand NGS application note describes how integrated multi-omics functionality in Strand NGS was used to find the regulato...3160 days ago
DAVI: Deep learning-based tool for alignment and single nucleotide variant identification
DAVI consists of models for both global and local alignment and for variant calling. W...ology, the models proposed in DAVI are generic and can be used across different NGS technologies as well as acros...1109 days ago
Next Generation Sequencing (NGS) Tutorials
Institute of computational biomedici...Cornell University provide an NGS workshop tutorial at http://chagall.med.cornell.edu/NGScourse/ You can also ad...0.1093/bioinformatics/btr441 ngs_backbone: a pipeline for read...ic-phd-school/course-schedule/ngsmetagenomics/ RNASeq:http://w...3450 days ago
Genome Assembly Tools and Software - PART2 !!
The genome assemblers generally take...e reads into haplotypes. GAM-NGS 1.1b – Genome Assemblie...uction Using Incremental HashingStringGraph is a novel, ha...contig sequences (FASTA) and NGS paired-read data (FASTA or FA...reads Filtering and ScaffoldingSLIQ , a set of simple lin...2648 days ago
Awesome perl frameworks, libraries and software - PART 2
licheng/gccfilter - gccfilter...R-1035955. Any opinions, findings, and conclusions or recommend...azon-MWS - Perl API bindings to Amazon Marketplace Web Ser...;- version agnostic Perl bindings for zeromq avar/sendmail-pmi...e-MtGox - MtGox API bindings for Perl masartz/p5-webservi...2457 days ago
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Perl one-liner for bioinformatician !!!
With the emergence of NGS technologies, and sequencing data most of the bi...code and they do one thing really well. These things include changing line spacing...ascii)'#converts ascii values into character strings.perl -le '@odd = grep {$_ % 2...3591 days ago
NGS course Medical Genomics, scheduled for 17-20 September 2013 in UZ Leuven (Belgium).
This course is open to all students and postdocs and registration for all academic participants is free of charge. To help us in organizing the course, please registe...3881 days ago
Accelerating Biology 2014:The Next Wave (18-22 February, 2014)
New advances in biology are being made at a rapidly increasing pace, largely due to ne...ies and a large amount of automation. The advent of Next Generation Sequencing (NGS) technology has brought in a...3807 days ago
NGS & Bioinformatics Summit Europe
NGS & Bioinformatics Summit Europe Conference...rmany Website: https://www.gtcbio.com/conference/ngseurope-overview Contact pers...isten Starkey We welcome you to join us at GTC’s NGS & Bioinformatics Summit E...3911 days ago
Structural polymorphism analysis from NGS data
The LabEx BASC (Biodiversity, Agroecosystems, Society, Clim...informatician to analyze Next Generation Sequencing (NGS) data analysis. In the contex...which has computational facilities and expertise in NGS data analysis, and will benef...3911 days ago
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Install grabseqs using conda !
vik@vik-Lenovo-ideapad-320-15ISK:~/Downloads/setu/setu$ conda install grabseqs -c louiejtaylor -c bioconda -c conda-forge Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.1017 days ago
Which of the following programming language is best for a bioinformatics beginner?
I will be doing NGS in the course of my research work and I will like to learn a programming language which is compatible with most bioinformatics tools or software. I basica...3493 days ago
Which math/statistics programming language/application do you most frequently use in bioinformatics?
I'm doing a bit more statistical analysis on some bioinformatics things lately, and I'm curious if there are any programming languages that are particularly good for this NGS computation. What suggestions do you guys have? Are there any languages that have exceptionally good libraries?3489 days ago
Next Generation Sequencing (NGS)
This group meant to discuss different sequencing methods and their data analysis. Now, sequencing is almost one of the most popular technique scientific fraternity pu...3870 days ago
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Will MinION Nanopore sequencing increase the number of Next Generation Sequencing projects?
Will MinION Nanopore sequencing increase the number of Next Generation Sequencing projects?Tags: MinION, Nanopore, Oxford, NGS, Strand NGS, Avadis NGS
3160 days ago