Results for "BBmap"

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  • BBTools for bioinformatician !

    BBMap.sh Mapping Nanopore reads BBMap.sh has a length cap of 6kbp....When mapping small RNA's with BBMap use the following flags to re...maxlength=55 seed=5 [As of BBmap v. 36.59] rendomreads.sh gain...n get the same sensitivity as BBMap by adding the flags "minid=0....

    2233 days ago

Bookmarks

  • BBMap help

    BBMAP • a solution for everything Th...There are common options for most BBMap suite programs and depending...is automatically chosen/set. Using BBMap Mapping Nanopore reads BBMa...https://www.biostarhandbook.com/tools/bbmap/bbmap-help.html

    2727 days ago

  • BBTools User Guide

    ...background information covering usage of all tools. Installation General Usage Guide Data Preprocessing Guide Specific Tool Guides: BBDuk BBMap BBMask BBMerge BBNorm Cal...

    2300 days ago

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Wire posts

  • BBMAP tools descriptions https://github.com/BioInfoTools/BBMap/blob/master/docs/ToolDescriptions.txt

    2593 days ago

  • #Filter out #reads with #size to discard reads containing many Ns. BBNorm ( https://sourceforge.net/projects/bbmap/ )

    2454 days ago

  • +4 more Wire posts

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  • BBMap help

    BBMAP • a solution for everything That content has been reformatted and it is being expanded to include more information. There are common options for most BBMap suite programs and depending on the file extension the input/output format is automatically chosen/set. Using BBMap M...

    Tags: Bioinformatics, BBMap, Help, NGS

    2727 days ago

  • BBTools for bioinformatician !

    BBMap.sh Mapping Nanopore reads BBMap.sh has a length cap of 6kbp. Reads longer than this will be broken into 6kbp pieces and mapped independently. Code: $ mapPacBio.sh -Xmx20g k=7 in=reads.fastq ref=reference.fa maxlen=1000 minlen=200 idtag ow int=f qin=33 out=mapped1.sam minratio=0.15...

    Tags: BBMap, Map, NGS, Reads, Sam, Bam, Contamination, Filtration

    2233 days ago

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