Results for "BLAST"
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http:--www.biotechnology.jhu.edu- Tutorial for PSI-BLAST, an extension of BLAST that uses matrix algebra. BLAST is a cornerstone bioinformatics tool at NCBI. BLAST is the Basic Local Alignment Search tool and will protein and DNA sequences that are related to a sequence that the user provides.Tags: PSI Blast, BLAST, NCBI, Alignment, Search, Sequence
3893 days ago
Skills: Ms Office, C, C++, HTML, CSS, Data Structure, Java, Linux, Biochemistry, FASTA, BLAST
2626 days ago
Bioinformatics 101 - Running BLAST
How to format the database for BLAST, run the command, view the output file, and use BioPerl and Perl to parse the output. By David Francis, Ohio State University. Delivered live at the Tomato Disease Workshop 2010. For more information, please visit http://www.extension.org/pages/32521/bioinform...Tags: BLAST, Perl, BioPerl, Bioinformatics
3881 days ago
- http:--www.biotechnology.jhu.edu- Tutorial for PSI-BLAST, an extension of BLAST that uses matrix algebra. BLAST is a cornerstone bioinformatics tool at NCBI. BLAST is the Basic Local Alignment Search tool and will protein and DNA sequences that are related to a sequence that the user provides.
Tags: PSI-BLAST, Bioinformatics, BLAST
3880 days ago
Demo 4: Using BLAST/BLAT in Ensembl
We demonstrate the BLAST/BLAT tool in Ensembl. Search for a sequence in Ensembl, and identify hits to the genome, or to genes, with this tool.Tags: BLAST, BLAT, EnsEMBL
3874 days ago
- In current era, we are handling huge amount of genomics data, and analysing it to make some biological sense out of it. Large-scale sequence studies requiring BLAST-based analysis produce huge amounts of data to be parsed. There are several BLAST parsers are available, but they are often missing ...
Tags: BLAST, Parser, BLAST Parser, C++
3874 days ago
- Dr. Rob Edwards describes how BLAST works
Tags: BLAST, Scores, Parameters, E-Values
3859 days ago
How to perform BLAST between a microrganism and human proteome ?
Hi, this is Nikita Bora, I want to know how to perform BLAST between a microrganism proteome and human proteome.. i have tried the stand alone BLAST, but it is not working. can you please suggest me something simple??Tags: BLAST, Alignments, Micro-organism, Human, Proteome
3686 days ago
- A new version (2.2.31) of the stand-alone BLAST executables (Linux, Windows and MacOSX on FTP) is now available. New features include support for BLAST-XML2 specification (information here) and JSON BLAST output format, as well as several bug fixes and improvements. The BLAST AMI at AWS will also...
Tags: BLAST, Standalone, BLAST+, Release, Update
3230 days ago
