Results for "BLAST"

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  • NCBI PSI-BLAST Tutorial

    http:--www.biotechnology.jhu.edu- Tutorial for PSI-BLAST, an extension of BLAST that uses matrix algebra. BLAST is a cornerstone bioinformatics tool at NCBI. BLAST is the Basic Local Alignment Search tool and will protein and DNA sequences that are related to a sequence that the user provides.

    Tags: PSI Blast, BLAST, NCBI, Alignment, Search, Sequence

    1517 days ago

  • mahree khan

    Skills: Ms Office, C, C++, HTML, CSS, Data Structure, Java, Linux, Biochemistry, FASTA, BLAST

    251 days ago

  • Bioinformatics 101 - Running BLAST

    How to format the database for BLAST, run the command, view the output file, and use BioPerl and Perl to parse the output. By David Francis, Ohio State University. Delivered live at the Tomato Disease Workshop 2010. For more information, please visit http://www.extension.org/pages/32521/bioinform...

    Tags: BLAST, Perl, BioPerl, Bioinformatics

    1506 days ago

  • NCBI PSI-BLAST Tutorial

    http:--www.biotechnology.jhu.edu- Tutorial for PSI-BLAST, an extension of BLAST that uses matrix algebra. BLAST is a cornerstone bioinformatics tool at NCBI. BLAST is the Basic Local Alignment Search tool and will protein and DNA sequences that are related to a sequence that the user provides.

    Tags: PSI-BLAST, Bioinformatics, BLAST

    1505 days ago

  • Demo 4: Using BLAST/BLAT in Ensembl

    We demonstrate the BLAST/BLAT tool in Ensembl. Search for a sequence in Ensembl, and identify hits to the genome, or to genes, with this tool.

    Tags: BLAST, BLAT, EnsEMBL

    1499 days ago

  • A fast package to parse BLAST

    In current era, we are handling huge amount of genomics data, and analysing it to make some biological sense out of it. Large-scale sequence studies requiring BLAST-based analysis produce huge amounts of data to be parsed. There are several BLAST parsers are available, but they are often missing ...

    Tags: BLAST, Parser, BLAST Parser, C++

    1499 days ago

  • BLAST

    Dr. Rob Edwards describes how BLAST works

    Tags: BLAST, Scores, Parameters, E-Values

    1484 days ago

  • How to perform BLAST between a microrganism and human proteome ?

    Hi, this is Nikita Bora, I want to know how to perform BLAST between a microrganism proteome and human proteome.. i have tried the stand alone BLAST, but it is not working. can you please suggest me something simple??

    Tags: BLAST, Alignments, Micro-organism, Human, Proteome

    1310 days ago

  • BLAST+ updated !!!

    A new version (2.2.31) of the stand-alone BLAST executables (Linux, Windows and MacOSX on FTP) is now available. New features include support for BLAST-XML2 specification (information here) and JSON BLAST output format, as well as several bug fixes and improvements. The BLAST AMI at AWS will also...

    Tags: BLAST, Standalone, BLAST+, Release, Update

    855 days ago

  • The BLAST parser http://kirill-kryukov.com/study/tools/blast-parser/ #BLAST #Parser #Genome #Match #Sequence #Similarity

    Tags: BLAST, Parser, Genome, Match, Sequence, Similarity

    751 days ago