Results for "Bacterial"
Blogs
...ic approach by Behzadi and Vingron in an easy-to-use program. Such method could be applied to reconstruction of partial homologous units such as bacterial operons or protein complexes....2520 days ago
List of Research Institutes in India (Biological Sciences/ Biotechnology)
...Gruhakalpa, 5-4-399/B, Nampally, Hyderabad - 500 001.Email: director@cdfd.org.inWeb: www.cdfd.org.in/Research Areas: Automated genome analysis, bacterial genetics, cancer biology, cel...2354 days ago
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Bookmarks
shovill: Assemble bacterial isolate genomes from Illumina paired-end reads
Shovill is a pipeline which uses SPAdes at its core, but alters the steps before and after the primary assembly step to get similar results in less time. Shovill also su...1209 days ago
Orione – a web-based framework for NGS analysis in microbiology
End-to-end NGS microbiology data analysis requires a diversity of tools covering bacterial resequencing, de novo assembly, scaffolding, bacterial RNA-Seq, gene annotation and metagenomics. However, the constructi...3564 days ago
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Pages
Bio++ : C Language libraries for your biological need
...on of Mitochondrial Genetic Diversity in Mammals. Genetics. 2008 January; 178(1): 351-361.Galtier N. A model of horizontal gene transfer and the bacterial phylogeny problem. Syst Biol....3938 days ago
Awesome perl frameworks, libraries and software - PART 2
...t::Unicode. It takes UTF-8 data and tries to represent it in US-ASCII characters. aleimba/bac-genomics-scripts - Collection of scripts for bacterial genomics aichaos/rivescript-...2484 days ago
Top-level pages
List of Bioinformatics Software Tools for Next Generation Sequencing
...esigned to run on “nux-like platforms” Input: BAM Output: VCF KvarQ Description: in silico genotyping for selected loci in bacterial genome, written in Python and...2899 days ago
Genome Assembly Tools and Software - PART1 !!
...er seeks to close the gap from each edge in an iterative manner. From a good number of tests we see the program yields excellent results both on bacterial en eukaryotic datasets....2676 days ago
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Wire posts
News
100K Foodborne Pathogen Genome Project
...nisms to its public database at the National Center for Biotechnology Information. 100K Genome Project, aims to sequence the genomes of 100,000 bacterial and viral genomes. http://10...3913 days ago
Opportunity posts
EMBL Postdoc position in Bacterial Gene Gain Loss
...s Department, Cambridge University) under the EMBL-EBI / Cambridge Computational Biomedical Postdoctoral Fellowship scheme. The project is on bacterial gene gain and loss and emergi...3171 days ago
JRF @ BHARATHIDASAN UNIVERSITY
...NIVERSITY, TIRUCHIRAPPALLI-620 024 WALK-IN-INTERVIEW FOR JUNIOR RESEARCH FELLOWSHIP Project title: Structural and Functional Evolution of Bacterial ADP-ribosylation Superfamily–...3883 days ago
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ResearchLabs posts
- ...fields of Bioinformatics, Biotechnology, Data Mining, and Information Retrieval. The group's research projects includes Comparative Genomics of Bacterial genomes, Metagenomics, Genomi...
3187 days ago
- ...plays important roles in our physiology, immunity, metabolism and sustenance. Within the human gastrointestinal tract alone there are over 1,000 bacterial species, which amounts to app...
2908 days ago
Video
- ...genetics include the development of genetic methods for understanding biological functions and the discovery of the functions of many yeast and bacterial genes. In 1980, Botstein and...
3863 days ago
TEDxCaltech - J. Craig Venter - Future Biology
...n genome and in 2007 for the first complete diploid human genome. In 2010 he and his team announced success in constructing the first synthetic bacterial cell. His present work focuse...3853 days ago
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Tags
shovill: Assemble bacterial isolate genomes from Illumina paired-end reads
Shovill is a pipeline which uses SPAdes at its core, but alters the steps before and after the primary assembly step to get similar results in less time. Shovill also supports other assemblers like SKESA, Velvet and Megahit, so you can take advantage of the pre- and post-processing the Shovill pr...Tags: shovill, Assemble, bacterial, isolate, genomes, Illumina, paired-end, reads
1209 days ago
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Comments
Comment on "Calling variants in non-diploid systems"
...oled samples where the number of samples is not known. This is the exact scenario we have here: in our sample we have multiple mitochondrial (or bacterial or viral) genomes, but we do...1034 days ago
Comment on "Sibelia: A comparative genomics tool"
...ATH" environment variable or input files are in the same folder with "Sibelia" executable. Directory "examples/Sibelia" contains two sets of bacterial genomes. The easiest way to...1275 days ago
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