Results for "Bin"
Top-level pages
Bioinformatics Courses Around the World
...senschaftliche Informatik (Master's level course) University of Tuebingen, Bioinformatics Finland...//www.flinders.edu.au/calendar/vol2/ug/BScBioinf.htm CA Abbott BINF 2201 (bioinformatics 2) La...3928 days ago
List of In-silico Binding Site Prediction Tools
...e spatial patterns of protein binding sites including both holo...icts interacting partners and binding sites by homology, by ins...structurally similar protein binding sites by local structural...euristics for defining ligand binding sites. Automatically sele...3728 days ago
Commercial and public next-gen-seq (NGS) software
...CS - Aligns SOLiD data. SOCS is built on an iterative variation of the Rabin-Karp string search algorithm,...454. Need about 20-25X coverage and paired reads. Developed by Daniel Zerbino and Ewan Birney at the Europ...3503 days ago
Software packages for next gen sequence analysis
...CS - Aligns SOLiD data. SOCS is built on an iterative variation of the Rabin-Karp string search algorithm,...454. Need about 20-25X coverage and paired reads. Developed by Daniel Zerbino and Ewan Birney at the Europ...3227 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...er tools (ex. Samtools BAQ), the likelihoods combine with individual-based prior...tools: samtools, tabix, vcftools, VarScan2, bambino, cmake, somaticsniper (User...e tracks; allows user to compare DNA expression/binding; Input: multiple: SGR/TX...2893 days ago
- ...ample Submit a batch serial job sbatch sbatch runscript.sh Run a script interatively srun srun --pty -p interact -t 10 --mem 1000 /bin/bash /bin/hostname Kill a job sca...
2898 days ago
Tools for Searching Repeats And Palindromic Sequences
...equence 5' CGAAGC 3' that, when reversed, still reads CGAAGC. Palindromes are important sequences within nucleic acids. Often they are the site of binding for specific enzymes (e.g...2195 days ago
Genome Assembly Tools and Software - PART1 !!
...COLA: a general framework for binning contigs in metagenomic st...Assembly from RNA-seq Data BinPacker is a novel de novo asse...from RNA-Seq data. Trinity combines three independent software...ement each other a lot. So combining contigs between MetaCompas...2670 days ago
Awesome perl frameworks, libraries and software - PART 1
.../Selenium-Remote-Driver - Perl Bindings to the Selenium Webdrive...) PerlRedis/perl-redis - Perl binding for Redis database pplu/...ease/FFI-Platypus - Write Perl bindings to non-Perl libraries wi...lin/perl-Redis-obsolete - perl binding for Redis database - late...2473 days ago
- ...g spades.py will show you the options: spades.py This produces: SPAdes genome assembler v3.10.1 Usage: /usr/local/SPAdes-3.10.1-Linux/bin/spades.py [options] -o <ou...
2335 days ago
