Results for "Binning"
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...sequences to deconvolute complex microbial communities, or metagenome binning, enables the study of individ...isms and their interactions. Here we developed an automated metagenome binning software, called MetaBAT, whi...2606 days ago
- MyCC, an automated binning tool that combines genomic signatures, marker genes and optional contig coverages within one or multiple samples, in order to visualize the metagenomes and to identify the reconstructed genomic fragments. More at http://www.nature.com/articles/srep24175
2609 days ago
- ...individual microbial genomes from metagenomes, as described in: Genome sequences of rare, uncultured bacteria obtained by differential coverage binning of multiple metagenomesMads A...
2609 days ago
- MaxBin is software for binning assembled metagenomic sequences based on an Ex...ompleteness, GC content and genome size in the binning summary page.Users can use ME...ins to find the taxonomy of each bin after the binning process is finished. https:/...
2606 days ago
CONCOCT: Clustering cONtigs with COverage and ComposiTion
A program for unsupervised binning of metagenomic contigs by using nucleotide composition, coverage data in multiple samples and linkage data from paired end reads. Warning! This so...2606 days ago
- ...ired-end reads LinkAge to automatically bin contigs into OTUs. Furthermore, COCACOLA seamlessly embraces customized prior knowledge to facilitate binning accuracy. News: Python versi...
2605 days ago
GroopM: Metagenomic binning toolset
GroopM is a metagenomic binning toolset. It leverages spatio-temoraldynamics (differential coverage) to accurately (and almost automatically)extract population genomes from multi-s...2605 days ago
- ...individual microbial genomes from metagenomes, as described in: Genome sequences of rare, uncultured bacteria obtained by differential coverage binning of multiple metagenomes Mads...
2598 days ago
gbtools: Interactive Visualization of Metagenome Bins in R
...be imported simultaneously; users can choose which annotations to plot. Bins can be manually defined from plots, or be imported from third-party binning tools and overlaid onto plots...2586 days ago
Metagenomics assembly workshop !!
...al will guide you through the typical steps of metagenome assembly and binning. The Tutorial Data Set...Gene Prediction Assembly Evaluation Read Mapping MetaQUAST Binning MaxBin Binning MetaBAT Bi...2563 days ago
