Results for "BioPerl"
Users
Skills: BioPerl63 days ago
- Skills: BioPerl
1787 days ago
- +6 more Users
Blogs
How to install Perl modules manually, using CPAN command, and other quick ways
...to install a Perl module using cpan:# perl -MCPAN -e 'install Bundle::BioPerl'(or)# cpancpan shell -- CPAN...install Bundle::CPAN or Bundle::CPANxxl?)cpan[1]> install "Bundle::BioPerl"In the example above, CPAN wi...3934 days ago
Five unique traits of effective computational biologist
...s; the good biological programmer learned it a year before because it looked interesting; and the great biological programmer also read about the BioPerl packages, genomics, DNA strin...3935 days ago
- +2 more Blogs
Bookmarks
- This bookmark is created to store the useful Perl and BioPerl tutorial links at one place. Feel free to share and add more useful tutorial links here ....
3887 days ago
- ...vide a unified, abstracted interface to multiple common gene annotation formats and the collection of data from multiple data files. They rely on BioPerl SeqFeature libraries and rela...
2982 days ago
- +4 more Bookmarks
Discussion topics
- ...stribution of Perl created for GUI application developers. Now, I wonder what should I pick to get started? Note: I am going to use BioPerl in near future. http://dwimp...
3900 days ago
Pages
Awesome perl frameworks, libraries and software - PART 4
...ization for Linked Data dcantrell/ldap-for-dhcp - OpenLDAP support for dhcpd in ISC dhcp cjfields/biome - An experimental Moose-based BioPerl implementation brennen/git-f...2478 days ago
Top-level pages
Useful Links for Bioinformaticians
...r Biologists (Weizmann Institute) www.webknowhow.net/dir/Perl/Tutorials/ Perl for Biologists savage.net.au/Perl-tutorials.html Welcome to the Bioperl Project ! XML Tutorial...3115 days ago
List of bioinformatics open source projects/software.
...uage) BioJava http://biojava.org/wiki/Main_Page Java (programming language) BioMOBY http://biomoby.org/ registry of web services BioPerl http://www.bioperl.org/wiki/Main_Page Perl lang...3741 days ago
- +1 more Top-level pages
Wire posts
Opportunity posts
Research Associate @ INDIAN INSTITUTE OF SPICES RESEARCH
...ience after MVSc/MPharm/ME/MTech with Bioinformatics Specialization. b Desirable: Experience in handling NGS data Programming skills in Python/Bioperl Emoluments : Rs:22000/- per...3754 days ago
Research Associate @ INDIAN INSTITUTE OF SPICES RESEARCH
...nce after MVSc/MPharm/ME/MTech with Bioinformatics Specialization. b Desirable: Experience in handling NGS data Programming skills in Python/Bioperl Emoluments : Rs:22000/- pe...3768 days ago
- +1 more Opportunity posts
Video
Bioinformatics 101 - Running BLAST
How to format the database for BLAST, run the command, view the output file, and use BioPerl and Perl to parse the output. By David Francis, Ohio State University. Delivered live at t...3881 days ago
Bio-Scripts
BioPerl to convert between sequence formats from Fasta to Genbank
#!/usr/local/bin/perl -w # Sequence formats to choose: Fasta, EMBL. GenBank, Swissprot, PIR and GCG use Bio::SeqIO; $inFile = "BRCA2.fa"; $in = Bio::SeqIO-...2900 days ago
Check if your coputer ready to use BioPerl
#!/usr/bin/perl use strict; use warnings; #bioperl example code use strict; use warnings; #make the bioperl module (class) accessible to your program use Bio::Seq; print"ok - ready to use Bio::Seq";2901 days ago
- +7 more Bio-Scripts
Tags
- BioinformaticsOnline(BOL) founder. http://bioinformaticsonline.com/about Within the broad domain of bioinformatics and computational biology, I mainly focus on chromosomal breakpoint and amniotes evolution. I (We) develop certain computational pipeline, and algorithms to harness the huge amount ...
Skills: Bioinformatics, R, Bioconductor, Perl, BioPerl, Java, BioJava
63 days ago
Bioinformatics: Introduction to PERL
This course is aimed at those new to programming and provides an introduction to programming using Perl. By the end of this course, attendees should be able to write simple Perl programs and to understand more complex Perl programs written by others. The course will be taught using the online Lea...Tags: Bioinformatics, Genetics, Perl, BioPerl
3935 days ago
- +13 more Tags
Comments
Comment on "How to install Perl modules manually, using CPAN command, and other quick ways"
If using conda conda create --name perlENV perlconda activate perlENV conda install -c bioconda perl-bundle-bioperl conda install -c bioconda perl-bioperl400 days ago
Comment on "How to install Perl modules manually, using CPAN command, and other quick ways"
To install BioPerl on a macOS system, you can follow these steps:...e following command: brew install cpanminus Install BioPerl by entering the following command: cpanm BioPerl Verify the installati...406 days ago
- +8 more Comments
