Results for "Bioconductor"
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...: load a table, plot some graphs, and perform some basic statistics. More extensive tutorials can be found on the project website and via bioconductor (not covered here). You can...3892 days ago
A simple tutorial for a complex ComplexHeatmap
...lexHeatmap (Gu, Eils, and Schlesner (2016)) is an R Programming Language (R Core Team (2020)) package that is currently listed in the Bioconductor package repository. ins...1113 days ago
- Convenient conversions between genome assemblie. The liftover package makes it easy to remap genomic coordinates to a different genome assembly. More at https://github.com/aaronwolen/liftover https://www.bioconductor.org/help/workflows/liftOver/
2992 days ago
HOMER: Software for motif discovery and next-gen sequencing analysis
...ial analysis with Cufflinks Differential expression analysis with R/Bioconductor Clustering of large expressi...array Basic analysis of Affymetrix Gene Expression Arrays using R/Bioconductor General Tips for Data Anal...2915 days ago
- ...s and visulization of functional profiles for genes and gene clustersBioconductor version: Release (3.3)This pa...ter:## try http:// if https:// URLs are not supportedsource("https://bioconductor.org/biocLite.R")biocLite("clu...
2863 days ago
Sushi: An R/Bioconductor package for visualizing genomic data
Sushi: An R/Bioconductor package for visualizing genomic data2788 days ago
- ...current breakpoint events. This easy-to-use algorithm, ‘GeneBreak’, is implemented in R (www.cran.r-project.org) and is available from Bioconductor (www.bioconductor.org/packages/release/bioc/htm...
2137 days ago
karyoploteR: plot whole genomes with arbitrary data
karyoploteR is an R package to create karyoplots, that is, representations of whole genomes with arbitrary data plotted on them. It is inspired by the R base graphics...1934 days ago
Epiviz: an interactive visualization tool for functional genomics data.
...criptome visualization. It has a flexible plugin framework so users can addd3 visualizations. You can see a video tour here. https://bioconductor.org/packages/release/bioc/htm...2111 days ago
- ...ample figures are based on following sources: http://mkweb.bcgsc.ca/hilbert/ http://corte.si/posts/code/hilbert/portrait/index.html http://bioconductor.org/packages/devel/bioc/html/...
2041 days ago
