Results for "Bioinformatics"
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Software developed in pevsner lab
DRAGON: Database Referencing of Array Genes Online SNOMAD: Standardization and Normalization of Microarray Data SNPduo: SNP Analysis Between Two Individuals SNPtrio: Analyzing and Visualizing and Inheritance Patterns in Trios SNPscan: Data Analysis and Visualization of SNP Dat...Tags: Bioinformatics, Cmputational Biology, Tools, Software, Pevsnerlab
3487 days ago
- Orange Bioinformatics extends Orange, a data mining software package, with common functionality for bioinformatics. The provided functionality can be accessed as a Python library or through a visual programming interface (Orange Canvas). The latter is also suitable for non-programmers. Orange Bi...
Tags: Bioinformatics, Cmputational Biology, Python, Orange, NGS, DataMining
3487 days ago
- Google Genomics provides an API to store, process, explore, and share DNA sequence reads, reference-based alignments, and variant calls, using Google's cloud infrastructure. Store alignments and variant calls for one genome or a million. Process genomic data in batch by running principal comp...
Tags: Bioinformatics, Computational Biology, Google, Genomics, Cloud
3477 days ago
Rosalind Bioinformatics problems !!!
Rosalind is a platform for learning bioinformatics and programming through problem solving. Take a tour to get the hang of how Rosalind works. http://rosalind.info/problems/list-view/Tags: Bioinformatics, Computational Biology, NGS, Genome, RNA-Seq, Algorithms, Online, Rosalind
3414 days ago
- Vital-IT is a bioinformatics competence center that supports and collaborates with life scientists in Switzerland and beyond. The multi-disciplinary team provides expertise, training and maintains a high-performance computing (HPC) and storage infrastructure, so as to help develop, maintain and e...
Tags: Bioinformatics, Computational biology, Genome, Server, Vital-IT, Switzerland
3414 days ago
- Explore genetic variation interactively. Compare entire cohorts in seconds with SQL-like queries. Compute transition/transversion ratios, genome-wide association, allelic frequency and more. Process big genomic data easily. Run batch analyses like principal component analysis and Hardy-W...
Tags: Bioinformatics, Computational biology, Genome, Server, Google, Genomics, Cloud, USA
3414 days ago
irishgrid: Irish Grid Mapping System
Perl module for creating geographic 10km-square maps using either SVG or PNG (with GD library) output format. Originally design to map the location of objects in a 10 km map IrishGrid includes: native support of the Irish Grid System (see http://www.osi.ie/) optimize for speed (there's as le...Tags: Bioinformatics, Computational Biology, Perl, Module, Map, Grid, Isris
3407 days ago
- ShRec3D is a program that aims at reconstructing a genome 3D structure (b) from the sole knowledge of the contacts between different genomic regions (a) as determined by Hi-C (http://www.ncbi.nlm.nih.gov/pubmed/19815776). There are two options to run ShRec3D (on linuX only so far): the first one...
Tags: Bioinformatics, Computational Biology, ShRec3D, 3D genome, Genome, Hi-C, Chromosome
3407 days ago
- RStudio IDE is a powerful and productive user interface for R. It’s free and open source, and works great on Windows, Mac, and Linux. The developers and expert trainers are the authors of several popular R packages, including ggplot2, plyr, lubridate, and others. More at http://www.rstudi...
Tags: Bioinformatics, Computational Biology, R, Module, CRAN, RStudio
3406 days ago
- The Bio.SeqLoc modules in seqloc are designed to represent positions and locations (ranges of positions) on sequences, particularly nucleotide sequences. My original motivation for writing these packages was handing the locations of genes in eukaryotic genomes. Handle sequence locations for bioi...
Tags: Bioinformatics, Computational Biology, Education, Sequence, Seq, Genome, View
3404 days ago
