Most Commonly used Awk by Bioinformatician
...print;l[$2]=1}' input.txt count different words (wc): awk '{for(i=1;i!=NF;++i)c[$i]++}END{for (x in c) print x,c[x]}' input.txt deal with simple CSV: awk -F, '{print $1,$2}' su...3902 days ago
2479 days ago
Converting BLAST output into CSV
.../ngs-scripts/, and you’re looking to run the script blast/blast-to-csv.py using Python: python /root/ngs-scripts/blast/blast-to-csv.py out.txt This output...2327 days ago
Steps to find all the repeats in the genome !
...to a file containing the lengths of the reference elements. This script will generate several output files, including .log.txt and .copynumber.csv, which contain quantitative i...238 days ago