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Results for "CSV"

Bio-Scripts

• • Abhimanyu Singh@abhimanyu

  

  Transpose the file coordinates and plot dendrogram in R

  #Save this as tr.awk { for (i=1; i

  2608 days ago

• • Jit@jit.aber

  

  Read a tab delimited file and search with perl

  use strict; use warnings; use Data::Dumper; use Text::CSV; use IO::Handle; my $file = "/home/urbe/Tools/Alienomics_v0.1/Alienomics/output/intermediate_files/rRNA/refGene.megablast"; open my $fh, "[0]\n"; warn Dumper $row; # To see the structure }

  2515 days ago

• • Rahul Nayak@rahul

  

  Create a heatmap with R

  bio

  2460 days ago

• • Jit@jit.aber

  

  Running Transrate !

  ...media/urbe/MyPassport/BorisTrinityAssembly/transrateSTAT/Trinity/contigs.csv [ INFO] 2018-07-13 14:54:40 : Writing analysis results to assemblies.csv

  2113 days ago

• • Jit@jit.aber

  

  Install and set up i-adhore for synteny and wgd analysis ! -- step by step --

  ...Installing: /home/urbe/anaconda3/envs/wgd/./testset/datasetII/alignment.csv -- Installing: /home/urbe/an...-- Installing: /home/urbe/anaconda3/envs/wgd/./testset/datasetI/families.csv -- Installing: /home/urbe/an...

  1194 days ago

• • Jit@jit.aber

  

  Run Pango on your multifasta file !

  .../envs/pangolin/lib/python3.8/site-packages/pangoLEARN/data/lineages.hash.csv Job stats: job...:09 Output file written to: /home/jnarayan/RF_DATA/FASTA/lineage_report.csv (pangolin) [jnarayan@hn1 FAS...

  878 days ago

• • Abhinav@abhinav

  

  R script for Circos plot !

  #!/usr/bin/env Rscript library(RCircos) # usage: Rscript make_circos.r # parse args args = commandArgs(trailingOnly=TRUE) sv.file

  290 days ago