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Results for "Cactus"

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• • Abhimanyu Singh@abhimanyu

  

  progressiveCactus

  Progressive Cactus is a whole-genome alignment package. Distribution package for the Prgressive Cactus multiple genome aligner. Dependencies are linked as submodules https://github.com/glennhickey/progressiveCactus

  Tags: Progressive, Cactus, Whole-genome, Alignment, Package, progressiveCactus

  2529 days ago

• • Jit@jit.aber

  

  Cactus: a reference-free whole-genome multiple alignment program

  Cactus is a reference-free whole-genome multiple alignment program. The principal algorithms are described here: https://doi.org/10.1101/gr.123356.111 Cactus uses substantial resources. For primate-sized genomes (3 gigabases each), you should expect Cactus to use approximately 120 CPU-days ...

  Tags: Cactus, reference-free, whole-genome, multiple, alignment, program

  1713 days ago

• • Jit@jit.aber

  

  Progressive alignment with Cactus: a multiple-genome aligner for the thousand-genome era https://www.biorxiv.org/content/biorxiv/early/2019/08/09/730531.full.pdf #Alignment #Cactus

  Tags: Alignment, Cactus

  1713 days ago