Check the Size of a directory & Free disk space.
The amount of databases we bioinformatician deal are just HUGE … In such cases, we always need to check our server for free spaces etc. I planned this article to explains 2 simple commands that most bioinformatician want to know when they start using Linux / BioLinux. First: Size of a dire...Tags: Bioinformatics, Computational Biology, Linux, du, df, Size, File, Usage, Space, Check, Linux
3665 days ago
Perl way to check if an array contains values
Perl is always is known for their flexibility (There is more than one way to do it). Followings are the quick way to check if a value exist in an array. do_something if 'flour' ~~ @ingredients # ~~ operand. BEWARE: it is broken.do_something if grep {$_ eq 'flour'} @ingredients ...Tags: Perl, Tricks, Array, Find, Check
2576 days ago
What are the best method to validate genome assembly ?
I am working on a metazoan genome. I wanted to try the best known method to validate the assembly structure. Your suggestions are welcome.Tags: Genome, Assembly, Validation, Check
2160 days ago
How to check the line begin with ">" in a file using Raku lang ?
How to check if the line begin with "#" or ">" etc in Raku aka perl6Tags: raku, fasta, header, check, begin, perl6, rakudo
1513 days ago