List of gene ontology software and tools
...results. http://biit.cs.ut.ee/gprofiler/ DAVID : Gene Functional Classification (Laboratory of Immunopathogenesis and Bioinformatics, NIAID) The Functional Classification Tool provides a rapid means t...3672 days ago
Structural variation: the hidden genomic treasure
...ping.2011a,2011b AGEa tools that implements an algorithm for optimal alignment of sequences with SVs.2011 BreakSeqa pipeline for annotation, classification and analysis of SVs at single...2665 days ago
Useful links to therapy, disease, drug and drug-target network data:
...ww.nature.com/nbt/journal/v25/ n10/suppinfo/nbt1338_S1.html Drug-Therapy Network: three layers of drug-therapy networks according to the ATC classification http://www.biomedcentral.com/...1396 days ago
Bioinformatics tools for telomere to telomere assembly !
...d sequencing data to genotype a wide spectrum of genetic variation (Tobias Marschall)● SQANTI3 – an automated pipeline for the classification of long-read transcripts that...954 days ago
Ancient whole genome duplication (WGD) detection tools !
...9 sub-modules in WGD kde: KDE fitting to the Ks distribution ksd: Ks distribution construction mcl: BLASP comparison of All-vs-ALl + MCL classification analysis. mix: Hybrid modeli...1118 days ago
Frequently used bioinformatics tools for viral genome analysis !
...PC. Deorowicz, S., Debudaj-Grabysz, A. & Grabowski, S. BMC Bioinformatics 14, 160 (2013). Kraken: Kraken: ultrafast metagenomic sequence classification using exact alignments. Wood,...1010 days ago
Classification of SARS-CoV2 Variant !
The scientists established some guidelines for determining whether a variant is a legitimate branch of an existing lineage: The variant should be transmitted from its orig...853 days ago
Useful Bioinformatics Analysis Tools !
CoMeta Classificier of reads from metagenomic sequencing experiments. • Kawulok, J., Deorowicz, S., CoMeta: Classification of Metagenomes Using k-mers, PLOS ON...826 days ago
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