645 days ago
List of bioinformatics workflow management tools !
...ty of software and hardware environments, from workstations to cluster, cloud, and high performance computi...Hadoop Oozie-based workflow system focused on genomics data analysis in cloud environments. [ paper-20...1127 days ago
Installing Bandage on Ubunty !
...ories/home:/sionescu/Debian ./ Release Get:11 http://packages.cloud.google.com/apt cloud-sdk-xenial InRelease [6.372 B...the previous index files will be used. GPG error: http://packages.cloud.google.com/apt cloud-sdk-xeni...2174 days ago
Next Generation Sequencing (NGS) Tutorials
...a high-performance analysis pipeline for whole-exome data http://www.biomedcentral.com/1471-2105/14/S7/S11 DDBJ read annotation pipeline: a cloud computing-based pipeline for...3472 days ago
3473 days ago
Genome Assembly Tools and Software - PART2 !!
...sized genomes. Contrail 0.8.2 – Assembly of Large Genomes using Cloud ComputingContrail is a Hadoop based genome assembler for assembling large genomes in the clouds BEAP 0.6 beta – Blast...2671 days ago
Awesome perl frameworks, libraries and software - PART 2
...dling forms. HackerOrientado/BypassCF - Script in Perl for Bypass CloudFlare gugod/railsish - A...subroutines in other programming languages Htbaa/WebService-Rackspace-CloudFiles - Perl Interface to...2479 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
...t al, Genome Biol 12:R22, 2011 PubMed Central Cloud-scale RNA-sequencing differen...nt & comparisons] Searching for SNPs with cloud computing. Langmead et al, Ge...Institute provides tools ArrayExpressHTS and R-Cloud for analysis of transcriptome...3764 days ago
Apps for Busy Bioinformatics Researchers !!!
...so determine the quality of your sequencing files. This app works with cloud storage access like Dropbox t...so determine the quality of your sequencing files. This app works with cloud storage access like Dropbox t...3526 days ago
Accelerating Biology 2014:The Next Wave (18-22 February, 2014)
...life. To be able to generate knowledge from the oceans of genomic data, enabling technologies like High Performance Computing, Grid Computing and Cloud Computing are the latest weap...3830 days ago
National Workshop on Data Deluge in Biology: Use of High-Performance Grid & Cloud computing
Workshop on "Data Deluge in Biology: Use of High-Performance Grid & Cloud computing"- December 19-20, 2...hop on "Data Deluge in Biology: Use of High-Performance Grid & Cloud computing" from December 19-2...3784 days ago
PostDocs positions in computer science in HELSINKI, FINLAND
...ersity of Helsinki form a leading hub of computer science and modelling, including Machine learning, Data mining, Algorithms, Computational Logic, Cloud computing, Distributed comput...3879 days ago
Senior Bioinformatics Software Developer, Hyderabad, Telangana
...a types Desired Competencies • Familiarity working in a scientific computing environment (NumPy, SciPy, Pandas etc.) • Familiarity working with Cloud technologies (AWS, Azure) •...2483 days ago
3505 days ago
Big genomic data on Google Cloud Platform
...o the petabytes. Google is working with the genomics community to define a standard API for working with big genomic data sets in the cloud. Building on Google Cloud Platform, we show how to stor...3473 days ago
2060 days ago
Installing ggplot2 and its dependencies on Ubuntu !
...e’, ‘withr’ trying URL 'https://cloud.r-project.org/src/contrib/ell...7371 bytes trying URL 'https://cloud.r-project.org/src/contrib/glu...aded 705 KB trying URL 'https://cloud.r-project.org/src/contrib/ply...6080 bytes trying URL 'https://cloud.r-project.org/src/contrib/dig...1535 days ago
Tags: NCBI, Commandline, API, Cloud
3505 days ago
Big genomic data on Google Cloud Platform
As the cost of DNA sequencing has dropped, the volume of data produced has risen into the petabytes. Google is working with the genomics community to define a standard API for working with big genomic data sets in the cloud. Building on Google Cloud Platform, we show how to store, process, explor...Tags: Bioinformatics, Computational Biology, Google, Genomics, Cloud
3473 days ago
Comment on "The Raku Programming Language"
Try online interface to run your Raku programs https://glot.io/new/perl6 A nice place to test and check the program on cloud1520 days ago
Comment on "Next Generation Sequencing (NGS) Tutorials"
Informatics for RNA-seq: A web resource for analysis on the cloud https://github.com/griffithlab/rnaseq_tutorial?1559 days ago