Results for "Clustering"

Bio-Scripts

  • Running Trinity on RNA-seq !

    ...----------- -------------- Trinity Phase 1: Clustering of RNA-Seq Reads -----------...ysalis ------------------------- -- (Contig Clustering & de Bruijn Graph Constructio...inityrnaseq-Trinity-v2.6.6/Chrysalis/BubbleUpClustering -i /home/urbe/Tools/trinityrn...

    2112 days ago

  • Set up WGD environment using conda !

    ...ssage and exit. Commands: dmd All-vs.-all diamond blastp + MCL clustering. kde Fit a KDE to a Ks di...ksd Ks distribution construction. mcl All-vs.-all blastp + MCL clustering. mix Mixture modeling of...

    1188 days ago

  • Script to rapid genome clustering based on pairwise ANI

    ...eads 32 Next, calculate pairwise ANI by combining local alignments between sequence pairs: anicalc.py -i -o Finally, perform UCLUST-like clustering using the MIUVIG recommended-...

    620 days ago