Results for "Command lines"
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How to install Perl modules manually, using CPAN command, and other quick ways
As a bioinformatics programmer, and crunchy data analyser you need to insta...odules using CPAN, make sure the cpan command is working. Following are the...e is not installed.# cpan-bash: cpan: command not found# perl -MCPAN -e she...Parameters for the 'perl Makefile.PL' comma...3938 days ago
- In comparative genome analysis work, we usually compare more than two gen...in a slightly different location. The commands below show where they were o...ave the patch into a file and use the command patch < patchfile.)Then, r...was fixed with the following apt-get comma...
3928 days ago
XAMPP: Starting Apache fail Ubuntu
Once you install XAMMP on linux, the most common problem you face is Apache failure. To fix the issues please use following comma...3607 days ago
Bioinformatics PhDs - Cover Letter
OverviewThe reception your cover letter will...ts of the job description. Many disciplines have their own conventions an...ly fall (i.e., before application deadlines) and you had an excellent con...e in your particular case. Many disciplines are sufficiently broad that l...3354 days ago
BioLinux Ubuntu Desktop folder and files disappeared !!
Restarted my BioLinux ubuntu computer after an update, and when I logged back in, I noticed that all of my files wen...us -qThen, open nautilus via Unity menu (press the Super key) or using the run comma...2989 days ago
How to install Perl modules on Mac OS X in easy steps !!
Today at work, I learned how to install Perl modules using CPAN. It’s a lot easier than I thought....uff installed, your installation will fail with errors about unavailable commands. 1.5) Install Comma...2742 days ago
Important Journals, Blogs and Forums for Bioinformaticians
Journals. Most journals have RSS feeds for their current updates. Bioinformatics -...and bioinformatics-related developments and funding opportunities. In between lines of code: Lex Nederbragt&rsquo...2631 days ago
Installing Perl environment on Linux
By using plenv, you can easily install and switch among different version of Perl. This will be installed under...nal cares. In Linux system, there are two types of outputs when you execute a comma...2310 days ago
BBTools for bioinformatician !
...atched.fq". Specifically, the command means "look for 25-mers in th...ntegration into automated pipelines where you do contaminant remova..., I never use BBDuk2 from the command line. Both have identical cap...rates subsequent analysis pipelines by a similar factor (up to 30...2259 days ago
Basic command-line to run BLAST
...hrough a demonstration of the command line, which you may not have...used much before. All of the commands below can copy/pasted. In....protein.faa This grep command uses the c flag, which reports a count of lines with match to the pattern. In t...2233 days ago
