Results for "Comparative Genomics"
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Comparative Genomics in Ensembl
The Ensembl browser provides viewable whole-genome alignments, homologues and phylogenetic gene trees, protein families, and ancestral sequences. Learn how to view and export these data in this video.Tags: Bioinformatics, Computational Biology, Genomics, Comparative Genomics, Ensembl
3376 days ago
- LASTZ is a program for aligning DNA sequences, a pairwise aligner. Originally designed to handle sequences the size of human chromosomes and from different species, it is also useful for sequences produced by NGS sequencing technologies such as Roche 454. More at http://www.bx.psu.edu/~rsharris/...
Tags: Bioinformatics, NGS, Comparative Genomics, Genome, LASTZ
2923 days ago
- The goal of our research is to better understand the biology of microbial organisms of significant ecological, veterinary and medical importance. To achieve this goal, our team combines the power of next generation DNA sequencing and bioinformatics with molecular biology and experimental proced...
Tags: Bioinformatics, Computational Biology, Genomics, RNAseq, NGS, omics, Comparative Genomics, Parasite, Evolution, Nicolas Corradi
3251 days ago
- What is new? Expansion of Protists and Fungi with hundreds of annotated genomes Variation data for bread wheat, rice, Aedes aegypti, and Ixodes scapularis Whole genome alignments for O. longistaminata and T. cacao Non-coding RNA gene models in Bacteria New assembly of tomato (version 2.50)...
Tags: Bioinformatics, Computational Biology, Genomics, Comparative Genomics, Ensembl
3230 days ago
Ensembl comparative genomics resources
The Ensembl comparative genomics resources are one such reference set that facilitates comprehensive and reproducible analysis of chordate genome data. Ensembl computes pairwise and multiple whole-genome alignments from which large-scale synteny, per-base conservation scores and constrained ele...Tags: Bioinformatics, Computational Biology, Genome, RAD-Seq, NGS, Comparative Genomics, Resources, EnsEMBL
2973 days ago
GLIBC_2.14 error with SatsumaSynteny !!
I run SatsumaSynteny on my server using following command: [jit@hm satsuma-code-0]$ ./SatsumaSynteny -q Genome/renamedG.fa -t Genome/genome_v4.fasta -o Genome/OutFile -m 128 -ni 10 -n 256 -chain_only But it kill the program with followng error: ./SatsumaSynteny: /lib64/libc.so.6: version...Tags: Satsuma, Synteny, SatsumaSynteny, BLIBC, Redhat, Linux, Server, Comparative Genomics, Alignment
2935 days ago
Smash: An alignment-free method to find and visualise rearrangements between pairs of DNA sequences
Smash is a completely alignment-free method/tool to find and visualise genomic rearrangements. The detection is based on conditional exclusive compression, namely using a FCM (Markov model), of high context order (typically 20). For visualisation, Smash outputs a SVG image, with an ...Tags: Bioinformatics, Visualization, Alignment, Free, NGS, Comparative Genomics
2915 days ago
Comparative genomics is a field of biological research in which the genome sequences of different species — human, mouse, and a wide variety of other organisms from bacteria to chimpanzees — are compared. This group is dedicated to Comparative genomics ...Tags: Bioinformatics, Computational Biology, Chromosomal, Comparative Genomics, Genomics
2515 days ago
- We are using a comparative genomics approach to better understand the structure, function and evolution of the human genome. Our group is one of the pioneers in the field of comparative genomics. We proposed the compact genome of the fugu (Takifugu rubripes) as a model vertebrate genome in 1993 (...
Tags: Bioinformatics, Comparative Genomics, Genomics
2677 days ago
Postdoctoral Research Assistant at RVC
This is a fixed term post for 24 months. We wish to recruit a highly motivated, postdoctoral scientist to carry out a BBSRC funded project in the laboratory of Dr. Denis Larkin. The project is focused on developing and applying new methods and algorithms to study genome and chromosome evolutio...Tags: Mammalian, Comparative Genomics, Evolution, Research, Jobs, Genomics, Denis Larkin
2112 days ago
