Results for "Compare"

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  • Alignment of closely related whole genomes/scaffolds

    With the relative ease and low cost of current generation sequencing technologies has led to a dramatic increase in the number of sequenced genomes for species across the tree of life. This increasing volume of data requires tools that can quickly compare multiple whole-genome sequences, millions...

    Tags: Whole genome, NGS, Genome, Scaffolds, pan-genome, Evolution, Alignments, Compare

    484 days ago

  • LAST

    LAST can: Handle big sequence data, e.g: Compare two vertebrate genomes Align billions of DNA reads to a genome Indicate the reliability of each aligned column. Use sequence quality data properly. Compare DNA to proteins, with frameshifts. Compare PSSMs to sequences Calculate th...

    Tags: LAST, Bioinformatics, Mapping, Match, Align, Sequences, Compare

    444 days ago

  • Comparative genomics resources https://www.dcode.org/ #Genomics #Resources #DCODE #Genome #Compare

    Tags: Genomics, Resources, DCODE, Genome, Compare

    268 days ago

  • LAST

    LAST can: Handle big sequence data, e.g: Compare two vertebrate genomes Align billions of DNA reads to a genome Indicate the reliability of each aligned column. Use sequence quality data properly. Compare DNA to proteins, with frameshifts. Compare PSSMs to ...

    Tags: Bioinformatics, Chromosome, Genome, NGS, Align, Compare, Similarity

    159 days ago

  • pyScaf

    pyScaf orders contigs from genome assemblies utilising several types of information: paired-end (PE) and/or mate-pair libraries (NGS-based mode) long reads (NGS-based mode) synteny to the genome of some related species (reference-based mode) Scaffolding  In reference-based mode, pyS...

    Tags: Bioinformatics, Chromosome, Genome, NGS, Align, Compare, Similarity, Scaffolding

    159 days ago

  • CLgenomics

    CLgenomics is a standalone desktop software specifically designed for bacterial genome analysis. This program has a powerful multi-genome browser, which enables rapid and responsive exploration of bacterial genomes. To use CLgenomics, individual genome data (genome sequences + annotation details...

    Tags: Bioinformatics, Analysis, Genome, Bacteria, Compare, CLgenomics

    85 days ago