Tools for Searching Repeats And Palindromic Sequences
What are genomic interspersed repeats? In the mid 1960's scientists discovered that many...if inverted (reversed 180°), still reads CGAAGC. The European Molecular Biology Open Software Suite (EMBOSS)...2195 days ago
Genome Assembly Tools and Software - PART1 !!
...your assembly. For the sake of computational memory saving and convenience...omic datasets has proven to be computationally challenging. We present a n...e described in the Genome Biology manuscript. misFinder v0...d-end data HaploClique is a computational approach to reconstruct...2670 days ago
Phylogenetic & Molecular Genetics Terms and Definitions
analog -- A feature that appears similar in two taxa which have...er states is the best. phylogenetics -- Field of biology that deals with the relations...rder is conserved. systematics -- Field of biology that deals with the diversity...2446 days ago
Alignment-free sequence comparison tools available for next-generation sequencing data analysis
kallisto Transcript abundance quantification from RNA-seq data (uses pseudoalignmen...directly from the genome sequencing reads Software (Python) http://jordan.biology.gatech.edu/page/software/stri...2355 days ago
Single Cell RNAseq data analysis tutorial !!
A major breakthrough (replaced microarrays) in the late 00’s and has been widely used since Measures the a...gle-cell RNA-seq data analyses https://github.com/nghiavtr/BPSC Sincera: A Computa...2335 days ago
List of visualization tools for network biology
Network analysis is any structured technique used to mathe...chastic simulation software http://magnet.systemsbiology.net/software/Dizzy/ DyCoNet...(SBML files) into standardized diagrams (Systems Biology Graphical Notation Process De...2272 days ago
Linux Commands Cheat Sheet for Bioinformatics and Computational Biology Professionals
The purpose of this cheat sheet is to introduce biologist and bioinformatician to the frequently used tools for NGS analysis as well as giving experience in writing one...2264 days ago
Awk for Bioinformatician and computational biologist
Awk is a programming language which allows easy manipulation of structured data and is mostly used for pattern scanning and processing. It searches one or more files to...2264 days ago
Computational resources for TE discovery and TE detection
...has generated increasing interest in developing new methods for their computational analysis. Following are the...enetics.uga.edu/retrolab/data/LTR_Struc.html LTR_MINER http://genomebiology.com/2004/5/10/R79/suppl/s7...2258 days ago
Webinar on RNA-Seq Data Analysis on 28 Feb 2018
Strand NGS is a biologist friendly NGS analysis tool that allow...iences, has over 11 years experience in molecular biology, next-generation sequencing b...ing. Dr. Suman holds a Ph.D in Molecular and Cell Biology from Indian Institute of Scie...2248 days ago