Results for "Conserve Synteny"

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  • Spines

    Spines Spines is a collection of software tools, developed and used by the...ges: Satsuma, a highly parallelized program for high-sensitivity, genome-wide synteny; Papaya, an all-purpose align...

    2970 days ago

  • Ensembl comparative genomics resources

    The Ensembl comparative genomics resources are one such r...ple whole-genome alignments from which large-scale synteny, per-base conservation scores...-based visualizations are also available including synteny displays, collapsible gene tr...

    2950 days ago

  • SATSUMA : Highly sensitive whole-genome synteny alignments.

    Satsuma is a whole-genome synteny alignment program. It takes two genomes, computes a...parts that are orthologous, i.e. following the conserved order and orientation o...F., & Lindblad-Toh, K. (2010). Genome-wide synteny through highly sensitive sequ...

    2876 days ago

  • NearHGT

    Horizontal gene transfer (HGT), the transfer of genetic mat...d technique named Near HGT, based on the synteny index, to measure the diverge...xhibiting exceptional deviations according to both synteny and mutability criteria, is c...

    2836 days ago

  • Bambus

    Bambus 2.0, the second generation Bambus scaffolder available as an open source...y use the output of MUMmer), physical mapping data, or information about gene synteny. Home Page: ...

    2781 days ago

  • Comparative genomics educational material and papers bookmarks

    Alignment of the porcine genome against seven other mammalian genomes (Supplementary Information) identified homologous synteny blocks (HSBs). Using porcine...

    2695 days ago

  • Method in Comparative genomics !!

    We present methods for the automatic determination of genome correspondence. The algorith...cross related species. We observed the pressure to conserve the reading frame of function...We used an enumeration approach to select strongly conserv...

    2695 days ago

  • Artemis Comparison Tool (ACT)

    ACT is a Java application for displaying pairwise comparisons between two or more DNA...s of similarity and difference between genomes and to explore conservation of synteny, in the context of the entire...

    2759 days ago

  • Spines

    Spines is a collection of software tools, developed and used by the Vertebrate Ge...Satsuma, a highly parallelized program for high-sensitivity, genome-wide synteny; Papaya, an all-pur...

    2677 days ago

  • Gene Synteny Database

    Comparative genomics remains a pivotal strategy to study the evolution of gene organiz...re of the question that can be investigated. Here we present Genomicus, a new synteny browser that can represent an...

    2659 days ago