Results for "Contamination"

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  • MetaBAT: An Efficient Tool for Accurately Reconstructing Single Genomes from Complex Microbial Communities

    MetaBAT, An Efficient Tool for Accurately Reconstructing Single Genomes from Complex Microbial Communities Grouping large genomic fragments assembled from shotgun metagenomic sequences to deconvolute complex microbial communities, or metagenome binning, enables the study of individual organisms ...

    Tags: Bioinformatics, Analysis, Assembly, Genome, MetaBAT, MetaGenomics, Contamination

    138 days ago

  • COCACOLA (binning metagenomic contigs using sequence COmposition, read CoverAge, CO-alignment, and paired-end read LinkAge)

    COCACOLA is a general framework that combines different types of information: sequence COmposition, CoverAge across multiple samples, CO-alignment to reference genomes and paired-end reads LinkAge to automatically bin contigs into OTUs. Furthermore, COCACOLA seamlessly embraces customized prior k...

    Tags: Bioinformatics, Analysis, Assembly, Genome, COCACOLA, MetaGenomics, Contamination

    137 days ago

  • Understanding Alien Index (AI) https://github.com/josephryan/alien_index #Alien @ Index #AlienIndex #AI #Contamination #Tool

    Tags: Alien, AlienIndex, AI, Contamination, Tool

    110 days ago

  • Decontamination https://img.jgi.doe.gov/er/doc/SingleCellDataDecontamination.pdf #Bacteria #Contamination

    Tags: Bacteria, Contamination

    77 days ago