DAGchainer: Computing Chains of Syntenic Genes in Complete Genomes
The DAGchainer software computes chains of syntenic genes found within complete genome sequences. As input, DAGchainer accepts a list of gene pairs...d. This software distribution includes both the DAGchainer utility and a Java-based grap...2624 days ago
2328 days ago
Synima: a Synteny imaging tool for annotated genome assemblies
...nima written in Perl, which uses the graphical features of R. Synima takes orthologues computed from reciprocal best BLAST hits or OrthoMCL, and DAGchainer, and outputs an overview of g...2004 days ago