Results for "DNA"

Bookmarks

  • Algorithms for DNA Sequencing (course offered each month)

    ...l methods -- algorithms and data structures -- for analyzing DNA sequencing data. We will learn a little about DNA, genomics, and how DNA sequen...gorithms and data structures and to analyze real genomes and DNA sequencing datasets." Source...

    697 days ago

  • Encode sequencing data freely available to download and use for academic means

    In Encode, regulatory elements investigated via DNA hypersensitivity assays, assays of DNA methylation, and chromatin immunoprecipitation (ChIP) of proteins that interact with DNA, including modified histones...

    1197 days ago

  • DnaSP v5: a software for comprehensive analysis of DNA polymorphism data

    DnaSP is a software package for a comprehensive analysis of DNA polymorphism data. Version 5 implements a number of new features and analytical methods allowing extensive DNA polymorphism analyses on larg...

    136 days ago

  • What Junk DNA? It’s an Operating System

    The report adds to growing experimental support for the idea that all that extra stuff in the human genes, once referred to as “junk DNA,” is more than functionless, spa...

    1403 days ago

  • DIAMOND

    DIAMOND is a sequence aligner for protein and translated DNA searches and functions as a drop-in replaceme...AST software tools. It is suitable for protein-protein search as well as DNA-protein search on short reads...

    56 days ago

  • Barrnap: Bacterial ribosomal RNA predictor

    ...mitochondria (12S,16S) and eukaryotes (5S,5.8S,28S,18S). It takes FASTA DNA sequence as input, and write...s the new NHMMER tool that comes with HMMER 3.1 for HMM searching in RNA:DNA style. NHMMER binaries for 64...

    41 days ago

  • LAST

    ...sequence data, e.g: Compare two vertebrate genomes Align billions of DNA reads to a genome Indica...each aligned column. Use sequence quality data properly. Compare DNA to proteins, with frameshifts...

    185 days ago

  • LAST

    ...sequence data, e.g: Compare two vertebrate genomes Align billions of DNA reads to a genome Indica...ty of each aligned column. Use sequence quality data properly. Compare DNA to proteins, with frameshifts...

    470 days ago

  • YASS :: genomic similarity search tool

    ...a genomic similarity search tool, for nucleic (DNA/RNA) sequences in fasta or pl...he heuristic pairwise local alignment tools for DNA sequences (FASTA, BLAST, PATT...ble to search more fuzzy repeats, as non-coding DNA/RNA. Another simple, but inte...

    416 days ago

  • PAired-eND Assembler for DNA sequences

    PANDASEQ is a program to align Illumina reads, optionally with PCR primers embedded in the sequence, and reconstruct an overlapping sequence.   More at https://github.com/neufeld/pandaseq

    442 days ago