Results for "DNA"
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...gned nucleotide or protein sequences, and to perform a wide variety of other motif-based analyses. The MEME Suite supports motif-based analysis of DNA, RNA and protein sequences. I...2680 days ago
- ...e sequence, including the primer.2.Pick and overlap to maximise the probability of the forward and reverse reads having come from a single piece of DNA.3.Identify the masking of the...
2649 days ago
FSA: Fast Statistical Alignment
FSA is a probabilistic multiple sequence alignment algorithm which uses a "distance-based" approach to aligning homologous protein, RNA or DNA sequences. Much as distance-based phyl...2635 days ago
DnaSP v5: a software for comprehensive analysis of DNA polymorphism data
DnaSP is a software package for a comprehensive analysis of DNA polymorphism data. Version 5 implements a number of new features and analytical methods allowing extensive DNA polymorphism analyses on larg...2635 days ago
- ...uch as inter-species or inter-strains. In addition, it can also show other sequence features like repeat sequence distributions in one whole-genome DNA sequence by comparing the gen...
2624 days ago
DAGchainer: Computing Chains of Syntenic Genes in Complete Genomes
...h sequence homology along with their genome coordinates. Using a scoring function which accounts for the distance between neighboring genes on each DNA molecule and the BLAST E-valu...2624 days ago
Strand Life Sciences announces the release of Strand NGS v3.1 at ASHG 2017
...Seq and Unique Molecular Identifiers (UMIs) for DNA-, RNA-, and small-RNA-Seq. S...for Unique Molecular Identifiers, or UMIs, for DNA-, RNA- and small-RNA-Seq. UMI...sies and low-grade FFPE samples, UMI support in DNA-Seq enables the detection of...2377 days ago
- DIAMOND is a sequence aligner for protein and translated DNA searches and functions as a drop-in replaceme...AST software tools. It is suitable for protein-protein search as well as DNA-protein search on short reads...
2555 days ago
- ...used.In either way, aligning your sequence reads to the reference sequence is called mapping. The most used mappers of DNA-seq data are BWA and Bowtie for DNA-Seq data and Tophat,&nbs...
2550 days ago
- A tetra-nucleotide is a fragment of DNA sequence with 4 bases (e.g. AGTC or TTGG). Pride et al. (2003) showed that the frequency of tetra-nucleotides in bacterial genomes...
2548 days ago
