Results for "Data"

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  • Awk

    Awk

    Awk is widely used these days for extraction and manipulation of large scale biological data in Unix/Linux.Most of the awk code is single liner. Useful Weblinks: http://www.grymoire.com/Unix/Awk.html http://www.hcs.harvard.edu/~dholland/computers/awk.html http://www.pement.org/awk/awk1line.tx...

    Tags: awk, gawk, nawk, sed, data, sequencing, one liner

    1618 days ago

  • http://sourceforge.net/projects/bio2rdf/ #App #Semantic #medical #data

    Tags: App, Semantic, medical, data

    1302 days ago

  • http://ropensci.org/packages/ #data #Viz

    Tags: data, Viz

    1302 days ago

  • http://gigadb.org/dataset/100102 #Nanopre #MinION #data

    Tags: Nanopre, MinION, data

    1207 days ago

  • https://github.com/itmat/rum/wiki/About-RUM #RNA #Seq #data

    Tags: RNA, Seq, data

    1106 days ago

  • #Bioinformatics, #R, #Genomics and #big #data #tutorial https://bioconductor.org/help/course-materials/

    Tags: Bioinformatics, R, Genomics, big, data, tutorial

    760 days ago

  • Automatic Filtering, Trimming, Error Removing and Quality Control for fastq data

    Automatic Filtering, Trimming, Error Removing and Quality Control for fastq dataAfterQC can simply go through all fastq files in a folder and then output three folders: good, bad and QC folders, which contains good reads, bad reads and the QC results of each fastq fi...

    Tags: Automatic, Filtering, Trimming, Error, Removing, Quality, Control, fastq, data

    64 days ago

  • poRe: an R package for the visualization and analysis of nanopore sequencing data

    Motivation: The Oxford Nanopore MinION device represents a unique sequencing technology. As a mobile sequencing device powered by the USB port of a laptop, the MinION has huge potential applications. To enable these applications, the bioinformatics community will need to design and build a s...

    Tags: poRe, R, package, visualization, analysis, nanopore, sequencing, data

    54 days ago

  • Understanding MinION data https://porecamp.github.io/2016/tutorials/PoreCamp2016-02-MinIONData.pdf #data #understand #learn

    Tags: data, understand, learn

    53 days ago

  • RITA: Rapid identification of high-confidence taxonomic assignments for metagenomic data

    RITA is a standalone software package and Web server for taxonomic assignment of metagenomic sequence reads. By combining homology predictions from BLAST or UBLAST with compositional classifications from a Naive Bayes classifier, RITA is able to achieve very high accuracy on short reads. Unlike o...

    Tags: Rapid, identification, high-confidence, taxonomic, assignments, metagenomic, data, RITA

    50 days ago