Results for "Distribution"
Top-level pages
List of In-silico Binding Site Prediction Tools
...g-pockets and occluded cavities are initial steps in protein structure-based drug design. Characterizing the active site's shape as well as the distribution of surrounding residues plays...3734 days ago
Next generation sequencing in R or bioconductor environment
...(DEGs) in count tables based on a model using the negative binomial distribution. It expects as input a data f...ical Bayes estimation and exact tests based on the negative binomial distribution to call differentially expres...3615 days ago
Commercial and public next-gen-seq (NGS) software
...library construction size estimates, and uses it to improve the spatial resolution of predicted binding sites. MACS also uses a dynamic Poisson distribution to effectively capture local...3509 days ago
Software packages for next gen sequence analysis
...library construction size estimates, and uses it to improve the spatial resolution of predicted binding sites. MACS also uses a dynamic Poisson distribution to effectively capture local...3233 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...ield, also used in ANNOVAR and VEP), HTML summary files SnpSIFT Description: Filter and manipulate annotated files; Part of SnpEff main distribution; one variants have been annot...2899 days ago
- ...ce command line tool for manipulating SAM/BAM files. Includes options for converting, sorting, indexing and viewing SAM/BAM files. The SAMtools distribution also includes bcftools, a set...
2859 days ago
Quick next generation sequencing (NGS) terms definition
...nts are assumed to be sampled from a normal distribution. Therefore, in the absence of...no-SV regions, therefore the fragment size distribution can be learned empirically fo...r” each base-pair to follow a Poisson distribution. Therefore, if the read depth...2512 days ago
Awesome perl frameworks, libraries and software - PART 1
...ube. rakudo/star - Rakudo Star Perl 6 distribution GouveaHeitor/nipe - Nip...nsho - A Glimpse at an Enlightned Perl Distribution dasdom/CreateAppStoreBill&nb...l MongoDB jonswar/perl-chi - Perl CHI distribution andrewcmyers/civs - Con...2479 days ago
- ...p;'\''()*+,-.\/0123456789:;<=>?@ABCDEFGHIJ/' f.fastq To convert FASTQ to FASTA: sed -n '1~4s/^@/>/p;2~4p' To get fastq read length distribution: cat reads.fastq | awk '{if(...
2207 days ago
