List of bioinformatics open source projects/software.
...Ntle An equivalent to the proprietary Vector NTI, a tool to analyze and edit DNA sequence files Integrate...large nucleotide sequence alignments Staden Package Sequence assembly, editing and analysis, primarily co...3745 days ago
Commercial and public next-gen-seq (NGS) software
...ght-weighted tool that aligns short sequences to a sequence database, such as the human reference genome. By default, BWA finds an alignment within edit distance 2 to the query seque...3507 days ago
Software packages for next gen sequence analysis
...ght-weighted tool that aligns short sequences to a sequence database, such as the human reference genome. By default, BWA finds an alignment within edit distance 2 to the query seque...3231 days ago
Comprehensive list of visualization tools for biological pathways
...biochemical networks http://www.celldesigner.org/ Edinburgh Pathway Editor Edit and draw pathway diagrams ht...p; Integrated environment composed of a central database and a visual editor, built around an extensive...2275 days ago
2862 days ago
Source Code and Pseudo Code !!
...ds Generate, Compute, Process, etc. Words such as set, reset, increment, compute, calculate, add, sum, multiply, ... print, display, input, output, edit, test , etc. with careful ind...2647 days ago
Perl Special Vars Quick Reference
...p;-c switch. $^D Current value of debugging flags $^F Maximum system file descriptor. $^I Value of the -i (inplace edit) switch. $^M Emergency...2632 days ago
Awesome perl frameworks, libraries and software - PART 1
...packets dod38fr/config-model - Perl module to create configuration editor wtih semantic validation p...ings for libsass (CSS::Sass) ranguard/text-vcard - Perl package to edit and create vCard(s) (RFC 2426...2477 days ago
Edit distance application in bioinformatics !
...are other popular measures of edit distance, which are calculate...using a different set of allowable edit operations. For instance,...odules on CPAN for calculating the edit distance between two strings....s module. The Damerau-Levenshtein edit distance is like the Levensht...2329 days ago
Tools for bacterial whole genome annotation
...Organism Database (GMOD). They can also be viewed in the Apollo genome browser; this feature of MAKER provides an easy means to annotate, view and edit individual contigs and BACs w...2320 days ago