List of Bioinformatics Software Tools for Next Generation Sequencing
...ly (and family ID) each variant hits, variant genomic location and coding effect (based on snpEff), loss-of-function mutation annotation, selected ENCODE annotation, allele frequency...2871 days ago
Genome Assembly Tools and Software - PART1 !!
...ment to an accuracy comparable to conventional mapping based pipelines (see evaluation in the tex directory). The assembly does not only encode SNPs and short INDELs, but al...2648 days ago
Perl Special Vars Quick Reference
...TRIE_MAXBUF} Control memory allocations for RE optimizations for large alternations. Encoding ${^ENCODING} The object reference to the Encode object, used to convert the s...2607 days ago
Awesome perl frameworks, libraries and software - PART 1
...joe/Autodatamosh - Perl script that automatically datamoshes MPEG4-encoded AVI videos. xtaran/unburden.../ IRC gateway in perl makamaka/JSON - perl implementation of JSON encoder/decoder lukec/cpan-selenium...2452 days ago
PerlOneLiner for Bioinformatician
...--------------- # ROT13 a string'y/A-Za-z/N-ZA-Mn-za-m/' # ROT 13 a fileperl -lpe 'y/A-Za-z/N-ZA-Mn-za-m/' file # Base64 encode a stringperl -MMIME::Base64 -e 'print encode_base64("string")'perl -MMIME:...2265 days ago