Results for "Enrichment"
Blogs
List of gene ontology software and tools
...cbi.1003343 Following are the most commonly used old and new GO term enrichment determination tools. These to...asyGO (China Agricultural University) EasyGO is designed to automate enrichment job for experimental biologis...3699 days ago
Bookmarks
- ...ignificance threshold in an EWAS study, and analyses whether there is enrichment for overlap of putative functional elements compared to matched background DMPs. It assesses enrichment on a per cell type basis, sin...
2735 days ago
- ...n motifs (Tomtom), finding preferred spacings between motifs (SpaMo), predicting the biological roles of motifs (GOMo), measuring the positional enrichment of sequences for known motifs...
2679 days ago
- +11 more Bookmarks
Top-level pages
Useful Publications and Websites for Deep Sequencing Data Analysis
...tion tool is here Course materials for a short course entitled Introduction to R and Bioconductor, held in Seattle in Dec 2010 Genomic Regions Enrichment of Annotations Tool - A web s...3769 days ago
Commercial and public next-gen-seq (NGS) software
...gions of high coverage, which represent Chromatin Immunoprecipitation enrichment of sequence fragments, indica...enriched compared to the normalized input DNA and computes a precise enrichment and significance. By Rozowsky...3508 days ago
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Wire posts
News
R package for visualising GO enrichment
An R package that visualizes the GO enrichment results as word clouds and arranges them together with figures of experimental data. This allows us to draw informative summary plots for...3929 days ago
- ...s who donated samples to the Simons Simplex Collection, a project of the Simons Foundation Autism Research Initiative. Scalpel found a very high enrichment for indels in children affect...
3536 days ago
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Opportunity posts
Research Fellow @ Mendel laboratory
...croarrays, RNA-Seq and miRNA-Seq data. Main activities will be: (i) data analysis (short-reads mapping, variants call and annotation, functional enrichment analysis of gene expression d...3803 days ago
Bioinformatics position at IRCCS Casa Sollievo della Sofferenza
...i) data analysis (short-reads mapping, genomics aberrations discovery and annotation, variants pathogenicity detection); (ii) functional/pathway enrichment analysis; (iii) biological ne...3514 days ago
- +1 more Opportunity posts
Tags
KOBAS: a web server for gene/protein functional annotation and functional gene set enrichment
KOBAS 3.0 is a web server for gene/protein functional annotation (Annotate module) and functional gene set enrichment(Enrichment module). For Annotate module, it accepts gene list as input, including IDs or sequences, and generates annotations for each gene based on multiple databases about ...Tags: KOBAS, web, server, gene, protein, functional, annotation, functional, gene, set, enrichment, KEGG
2014 days ago
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Comments
Comment on "List of gene ontology software and tools"
Chen EY, Tan CM, Kou Y, Duan Q, Wang Z, Meirelles GV, Clark NR, Ma'ayan A. Enrichr: interactive and collaborative HTML5 gene list enrichment analysis tool. BMC Bioinformatics. 2013;128(14). http://amp.pharm.mssm.edu/Enrichr/1482 days ago
Comment on "List of gene ontology software and tools"
...O tools. I found this new tool interesting http://www.funrich.org/ . FunRich is a stand-alone software tool used mainly for functional enrichment and interaction network analy...2884 days ago
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