Blast result parser with Perl and Bioperl
#!/usr/local/bin/perl # # Dr. Xiaodong Bai # It may be freely distributed under GNU...ated and ready for import into a spreadsheet program for browsing and further analysis. # use strict; use warni...2899 days ago
Perl script to run SATSUMA in loop !
#!/usr/bin/perl -w use strict; use File::Temp qw(tempfile); # Usage perl 1by1.pl for SATSUMA analysis # User need to set the ref...2125 days ago
Install Parrot Virtual Machine !
#Parrot is a virtual machine designed to efficiently compile and execute bytecode for dy...alled.................................no. auto::coverage - Are coverage analysis tools installed...Negative re...1521 days ago
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Installing pb-assembly on Linux !
[jnarayan@hmem00 ~]$ module avail ----------------------...ssibly newer than the currently available SMRT(R) Analysis builds. While # # efforts ha...ssibly newer than the currently available SMRT(R) Analysis builds. While # # efforts ha...2019 days ago
Setting up falconUnzip conda environments for genome assembly !
...$ conda deactivate ➜ Analysis_Results source activate denovo_asm (denovo_asm) ➜ Analysis_Results conda install pb-asse...e currently available SMRT(R) Analysis builds. While # # efforts ha...e currently available SMRT(R) Analysis builds. While # # efforts ha...1974 days ago
Pack a perl program with their dependencies on Ubuntu !
#Follow steps to create your own executable ./web jit@jit-HP-Pro-3335-MT:~/Downloads/...materials ... Biostatistics is an innovative field that involves the design, analysis, and interpretation of data f...1496 days ago
1493 days ago
Install and set up i-adhore for synteny and wgd analysis ! -- step by step --
#Need to download i-adhore-3.0.01.tar.gz from https://wdiceryfd4rjn74bjhhtz2k5di--bioinformatics-psb-ugent-be.translate.goog/webtools/i-adhore/licensing/ #Follow the...1188 days ago