List of In-silico Binding Site Prediction Tools
...oms, i.e. including their radii). PocketPicker: http://gecco.org.chemie.uni-frankfurt.de/pocketpicker/index.html Background: Identification and evaluation of surface binding-pockets an...3734 days ago
Commercial and public next-gen-seq (NGS) software
...ce alignment of paired-end and single-end Illumina reads. Uses a Needleman-Wunsch algorithm. Can support Bis-Seq. Commercial. Available free for evaluation, educational use and for use...3509 days ago
Software packages for next gen sequence analysis
...ce alignment of paired-end and single-end Illumina reads. Uses a Needleman-Wunsch algorithm. Can support Bis-Seq. Commercial. Available free for evaluation, educational use and for use...3233 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...Displayed on web or can be downloaded in Excel or RDF format MutationTaster Description: (Last post on site 2014) Web app program; Rapid evaluation of disease causing alteration...2899 days ago
Genome Assembly Tools and Software - PART1 !!
...to conventional mapping based pipelines (see evaluation in the tex director...e rNa-seq Assembly with or without the Truth Evaluation DETONATE consists of two c...s. REAPR 1.0.18 – Genome Assembly Evaluation REAPR (Recognising Errors...2676 days ago
Single Cell RNAseq data analysis tutorial !!
...SinQC: A Method and Tool to Control Single-cell RNA-seq Data Quality http://www.morgridge.net/SinQC.html TSCAN: Pseudo-time reconstruction and evaluation in single-cell RNA-seq analys...2341 days ago
List of visualization tools for network biology
...PIVOT Layout algorithms for visualizing protein interactions and families http://acgt.cs.tau.ac.il/pivot/ ProCope Prediction and evaluation of protein complexes from pur...2278 days ago
Tools to Predict the Impact of Missense Variants !
...ariants. Study of 10 tools on five datasets that such a comparative evaluation of these tools is hindered by...same protein occurring both in the datasets used for training and for evaluation of these tools, which may lea...2193 days ago