Protocol for De novo Genome Assembly using Illumina Reads
...efficiency of the assembly. Read Quality Control:Check the qualiy with fastQC.Scripthttps://bioinformaticsonline.com/snippets/view/42540/install-fastqc-using-conda Quality trimming...1189 days ago
Illumina based assembly pipeline steps !
Illumina Merge re-sequenced FastQ files (cat) Read QC (FastQC) Adapter trimming (fastp) Removal of host reads (Kraken 2; optional) Variant calling Read alignment (Bowtie 2) S...862 days ago