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Results for "FastQC"

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• • Neelam Jha@neelam

  

  Picard

  Picard is a set of command line tools for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF. These file formats are defined in the Hts-specs repository. See especially the SAM specification and the VCF specification. Note that the information on this pag...

  Tags: Bioinformatics, NGS, Assembly, BAM, SAM, CRAM, Picard, FastQC, Tool, Software

  2909 days ago

• • Jit@jit.aber

  

  Understanding Fastqc Output

  Understanding Following table and graphs Duplication level kmer profile per base GC content per base N content per base quality per base sequence content per sequence GC content per sequence quality sequence length distribution More at http://www.bioinformatics.babraham.ac.uk/projec...

  Tags: Bioinformatics, NGS, Assembly, Quality, FastQC, Tutorial

  2923 days ago

• • Abhimanyu Singh@abhimanyu

  

  #Duplication #FastQC http://proteo.me.uk/2013/09/a-new-way-to-look-at-duplication-in-fastqc-v0-11/ #Sequencing #NGS

  Tags: Duplication, FastQC, Sequencing, NGS

  2826 days ago

• • Shruti Paniwala@shruti

  

  FQC Dashboard: Integrates FastQC results into a web-based, interactive, and extensible FASTQ quality control tool

  FQC is software that facilitates quality control of FASTQ files by carrying out a QC protocol using FastQC, parsing results, and aggregating quality metrics into an interactive dashboard designed to richly summarize individual sequencing runs. The dashboard groups samples in dropdowns for navigat...

  Tags: FQC, Dashboard, Integrates, FastQC, results, web-based, interactive, extensible, FASTQ, quality, tool

  1254 days ago