Results for "Format"

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  • Enzyme Portal

    Enzyme Portal- To look for information about the biology of a protein with enzymatic activity. The enz...and also external ones such as BioPortal. Its main goal is to provide information about enzymes in a suitabl...

    3859 days ago

  • Bioinformatics Protocols

    ...ATK: Unified Genotyper* FreeBayesEach of these tools takes as its input a BAM file of aligned reads and generates a list of likely variants in VCF format Pipelines are for those who...

    3616 days ago

  • irishgrid: Irish Grid Mapping System

    Perl module for creating geographic 10km-square maps using either SVG or PNG (with GD library) output format. Originally design to map the location of objects in a 10 km map IrishGri...

    3381 days ago

  • BioScripts

    ...lease bookmark collection of bioinformatics tools, scripts, codes that...form both simple and complex bioinformatics tasks. The next-generatio...Bi, 454/Roche. But thier sequence format is different, also they have...rks them for the benefits of bioinformatics community. https://code.g...

    3197 days ago

  • BioToolbox

    ...quality end-user scripts for bioinformatic analysis, including working...res from a variety of modern file formats, and conversion between file...o multiple common gene annotation formats and the collection of data f...ting and analyzing data, and data format conversion. More at http://c...

    2961 days ago

  • REAPR: a universal tool for genome assembly evaluation

    ...n the error calls. The software requires as input an assembly in FASTA format and paired reads mapped to the assembly in a BAM file. Mapping information such as the fragment cover...

    2913 days ago

  • YASS :: genomic similarity search tool

    YASS is a genomic similarity search tool, for nucleic (DNA/RNA) sequences in fasta or plain text format (it produces local pairwise alignments). Like most of the heuristic pairwise lo...

    2888 days ago

  • mafTools

    Bioinformatics tools for dealing with Multiple Alignment Format (MAF) files.

    2868 days ago

  • methylKit

    ...th base-pair resolution data for 5hmC obtained from Tab-seq or oxBS-seq. It can also handle whole-genome bisulfite sequencing data if proper input format is provided.

    2856 days ago

  • GAEMR

    ...generate specific charts and tables. GAEMR standardizes input by converting a variety of read types to Binary Alignment Map (BAM) format, allowing a single input format to be entered into GAEMR&rsqu...

    2845 days ago