Tags: Bioinformatics, Computational Biology, Big data, Analysis, Share, Run, Compute, Free, Arvados, Organise, Store
3478 days ago
Smash: An alignment-free method to find and visualise rearrangements between pairs of DNA sequences
Smash is a completely alignment-free method/tool to find and visualise genomic rearrangements. The detection is based on conditional exclusive compression, namely using a FCM (Markov model), of high context order (typically 20). For visualisation, Smash outputs a SVG image, with an ...Tags: Bioinformatics, Visualization, Alignment, Free, NGS, Comparative Genomics
2894 days ago
Stay-at-Home RevBayes Workshop
Stay-at-Home RevBayes Workshop Location: Anywhere (online-only event) Dates: 7/13, 2020 to 8/12, 2020 Instructors: Joƫlle Barido-Sottani, Walker Pett, Josh Justison, Wade Dismukes, Luiza Fabreti, Tracy Heath, Jeremy M. Brown, Rosana Zenil-Ferguson Register: https://iastate.qualtrics.com/jfe/f...Tags: Stay-at-Home, RevBayes, Workshop, Tree, Microevolution, Free
1378 days ago
BamView: a free interactive display of read alignments in BAM data files
To run the application on UNIX from the downloaded jar file run the UNIX: java -mx512m -jar BamView.jar and extra command line options are given when '-h' is used: java -jar BamView.jar -h BAM files can be specified on the command line with the '-a' option: java -mx512m -jar BamView.jar -a p...Tags: BamView, free, interactive, display, read, alignments, BAM, data, files
1967 days ago