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Arvados is a free and open source bioinformatics platform for genomic and biomedical data. User can Store | Organize | Compute | Share the data for free.Tags: Bioinformatics, Computational Biology, Big data, Analysis, Share, Run, Compute, Free, Arvados, Organise, Store
3505 days ago
Smash: An alignment-free method to find and visualise rearrangements between pairs of DNA sequences
Smash is a completely alignment-free method/tool to find and visualise genomic rearrangements. The detection is based on conditional exclusive compression, namely using a FCM (Markov model), of high context order (typically 20). For visualisation, Smash outputs a SVG image, with an ...Tags: Bioinformatics, Visualization, Alignment, Free, NGS, Comparative Genomics
2921 days ago
BamView: a free interactive display of read alignments in BAM data files
To run the application on UNIX from the downloaded jar file run the UNIX: java -mx512m -jar BamView.jar and extra command line options are given when '-h' is used: java -jar BamView.jar -h BAM files can be specified on the command line with the '-a' option: java -mx512m -jar BamView.jar -a p...Tags: BamView, free, interactive, display, read, alignments, BAM, data, files
1994 days ago
Google Colab : Google Colab is a free cloud service and now it supports free GPU!
You can: improve your Python programming language coding skills. develop deep learning applications using popular libraries such as Keras, TensorFlow, PyTorch, and OpenCV. If you have just a single notebook to submit, use the website https://google-colab.com/, it is really easy, ...Tags: Google, Colab, free, cloud, service, supports, free, GPU
1547 days ago
- The specimens were collected by the Oxford Wytham Woods and Edinburgh Lohse lab teams. DNA extraction and sequencing was carried out by the Sanger Institute Scientific Operations teams. Assemblies were carried out by the Tree of Life team (Shane McCarthy) and colleagues in Pacific Biosciences (Jo...
Tags: data, reads, free, tree, assembly
1539 days ago
Bioinformatics Training Material !
Glittr is a curated list of bioinformatics training material.All material is: In a GitHub or GitLab repository Free to use Written in markdown or similar NOTE: This list of courses is selected only based on the above criteria.There are no checks on quality. https://glittr.org/?...Tags: glitter, git, bioinformatics, training, material, learn, online, free
404 days ago
