Results for "GC"

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  • Blobology

    Tools for making blobplots or Taxon-Annotated-GC-Coverage plots (TAGC plots) to visualise the contents of genome assembly data sets as a QC step Blaxter Lab, Institute of Evolutionary Biology, University of Edinburgh Goal: To create blobplots or Taxon-Annotated-GC-Coverage plots (TAGC plots) to...

    Tags: Bioinformatics, Blobology, Blobplot, TAGC Plot, GC, Assembly, NGS, QC

    2845 days ago

  • #GC-Profile: a web-based tool for #visualizing and analyzing the #variation of #GC content in #genomic sequences https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1538862/

    Tags: GC, visualizing, variation, GC, genomic

    2589 days ago

  • gbtools: Interactive Visualization of Metagenome Bins in R

    We have developed gbtools, a software package that allows users to visualize metagenomic assemblies by plotting coverage (sequencing depth) and GC values of contigs, and also to annotate the plots with taxonomic information. Different sets of annotations, including taxonomic assignments from cons...

    Tags: Bioinformatics, gbtools, Genome, Tool, GC, Bin, Plot

    2559 days ago

  • NanoPack: visualizing and processing long-read sequencing data

    The NanoPack tools are written in Python3 and released under the GNU GPL3.0 License. The source code can be found at https://github.com/wdecoster/nanopack, together with links to separate scripts and their documentation. The scripts are compatible with Linux, Mac OS and the MS Windows 10 sub...

    Tags: NanoPack, visualization, processing, long-read, sequencing, data, nanopore, guality, gc, nanoqc

    2057 days ago