GAGE : Genome Assembly Gold-standard Evaluation
GAGE is an evaluation of the very latest large-scale genome assembly algorithms. We have organized this "bake-off" as an attempt to produce a realistic assessment of g...2760 days ago
2438 days ago
Ranbow: a haplotype assembler for polyploid genomes
...ganismĀ“s genome. Ranbow has three main modes of function: ranbow hap: for haplotyping ranbow eval: for evaluating of the assemble haplotypes by gold standard (long) reads ranbo...2128 days ago
gEVAL: Genome Evaluation Browser
...ematic regions and assist in strategizing potential solutions for these issues. This facilitates the improvement of overall assemblies to a “gold” standard for release a...1746 days ago
PyParanoid: a pipeline for rapid identification of homologous gene families in a set of genomes
...is a pipeline for rapid identification of homologous gene families in a set of genomes - a central task of any comparative genomics analysis. The "gold standard" for identifying hom...1324 days ago