GRASS: a generic algorithm for scaffolding next-generation sequencing assemblies.
GRASS (GeneRic ASsembly Scaffolder)-a novel algorithm for...blies capable of using diverse information sources. GRASS offers a mixed-integer progra...approximation of the original problem. We compared GRASS with existing HTS scaffolders...2502 days ago
GRASS: a generic algorithm for scaffolding next-generation sequencing assemblies.
GRASS (GeneRic ASsembly Scaffolder)-a novel algorithm for scaffolding second-generation sequencing assemblies capable of using diverse information sources. GRASS offers a mixed-integer programming formulation of the contig scaffolding problem, which combines contig order, distance and orientation...Tags: GRASS, Generic, Algorithm, Scaffolding, NGS, Sequencing, Assemblies
2502 days ago